Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IG620_RS11400 Genome accession   NZ_CP147682
Coordinates   2384914..2385297 (-) Length   127 a.a.
NCBI ID   WP_004280711.1    Uniprot ID   A0AAJ3AH21
Organism   Acinetobacter lwoffii strain CCTCC M20191004     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2379914..2390297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IG620_RS11385 (IG620_11385) - 2381859..2383931 (-) 2073 WP_338839846.1 methyl-accepting chemotaxis protein -
  IG620_RS11390 (IG620_11390) - 2383978..2384514 (-) 537 WP_004280709.1 chemotaxis protein CheW -
  IG620_RS11395 (IG620_11395) - 2384520..2384888 (-) 369 WP_004280710.1 response regulator -
  IG620_RS11400 (IG620_11400) pilG 2384914..2385297 (-) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  IG620_RS11405 (IG620_11405) - 2385585..2386232 (+) 648 WP_338839850.1 hypothetical protein -
  IG620_RS11410 (IG620_11410) - 2386284..2387411 (+) 1128 WP_325754983.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14315.39 Da        Isoelectric Point: 4.7172

>NTDB_id=948011 IG620_RS11400 WP_004280711.1 2384914..2385297(-) (pilG) [Acinetobacter lwoffii strain CCTCC M20191004]
MDDKFQNLKIMVIDDSKTIRRTAETLLQREGYEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=948011 IG620_RS11400 WP_004280711.1 2384914..2385297(-) (pilG) [Acinetobacter lwoffii strain CCTCC M20191004]
ATGGACGATAAATTCCAAAATCTAAAAATTATGGTTATTGATGACTCAAAGACCATTCGTCGTACTGCGGAAACTCTTCT
TCAACGCGAAGGTTATGAGGTCATTACTGCAGTAGACGGTTTTGAGGCTTTGTCAAAAATTGCCGAAGCAAATCCAGATA
TCGTTTTTGTAGATATTATGATGCCGCGCCTAGATGGTTACCAAACCTGCGCCTTAATCAAAAACTCTCAGAATTACCAG
AATATTCCTGTGATTATGCTATCAAGTAAAGATGGCTTATTTGATCAGGCCAAAGGTCGTGTCGTGGGTTCAGATGAATA
CCTGACCAAACCTTTTAGTAAAGATGAATTGCTCAATGCAATCCGTAACCATATTAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

45.299

92.126

0.417
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362