Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   IG620_RS05885 Genome accession   NZ_CP147682
Coordinates   1229595..1230302 (+) Length   235 a.a.
NCBI ID   WP_004280141.1    Uniprot ID   A0A2K8USH5
Organism   Acinetobacter lwoffii strain CCTCC M20191004     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1224595..1235302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IG620_RS05850 (IG620_05850) - 1224860..1225276 (+) 417 WP_004646572.1 DUF6691 family protein -
  IG620_RS05855 (IG620_05855) - 1225279..1226151 (+) 873 WP_005262089.1 MBL fold metallo-hydrolase -
  IG620_RS05860 (IG620_05860) - 1226220..1227002 (+) 783 WP_071850361.1 sulfite exporter TauE/SafE family protein -
  IG620_RS05865 (IG620_05865) - 1227095..1227250 (+) 156 WP_004646576.1 hypothetical protein -
  IG620_RS05870 (IG620_05870) - 1227189..1227727 (-) 539 Protein_1134 transposase -
  IG620_RS05875 (IG620_05875) - 1227922..1228959 (+) 1038 WP_005262073.1 metallophosphoesterase -
  IG620_RS05880 (IG620_05880) - 1229025..1229447 (-) 423 WP_338841137.1 OsmC family protein -
  IG620_RS05885 (IG620_05885) crp 1229595..1230302 (+) 708 WP_004280141.1 cAMP-activated global transcriptional regulator CRP Regulator
  IG620_RS05890 (IG620_05890) - 1230476..1231525 (+) 1050 Protein_1138 NADP(H)-dependent aldo-keto reductase -
  IG620_RS05895 (IG620_05895) - 1231669..1232034 (+) 366 WP_004646580.1 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein -
  IG620_RS05900 (IG620_05900) clpB 1232286..1234865 (+) 2580 WP_004646581.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26255.96 Da        Isoelectric Point: 4.7275

>NTDB_id=948002 IG620_RS05885 WP_004280141.1 1229595..1230302(+) (crp) [Acinetobacter lwoffii strain CCTCC M20191004]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNAGDF
FGEMGLFEVNPQRTAEVRTRDVCEIAEITYENFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEASEAVADGAIDE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=948002 IG620_RS05885 WP_004280141.1 1229595..1230302(+) (crp) [Acinetobacter lwoffii strain CCTCC M20191004]
ATGACTTCAAACTTTTCACAATTAAGCACTGATGCGCTTTCTCCGGGGCAATTACCAGAATCCGTGAAAGCACTGTTAAA
ACGTGCATATATTAATCGTTATCCAAAACGTACCACGATCATTGATGCAGGATCAGAATCTAAATCTTTATATTTAATTC
TGAAGGGGTCTGTATCTATCATTCTTCGTGAAGATGATGATCGTGAAATTGTCGTGGCTTATTTAAATGCGGGTGACTTC
TTTGGGGAAATGGGTCTATTCGAGGTTAATCCACAACGTACTGCGGAAGTTCGTACGCGTGATGTGTGTGAAATTGCCGA
AATTACCTATGAAAACTTTCACGAAATCAGCAAGCAATATCCTGATCTGAGCTATGCGGTATTTGCTCAATTAGTACGTC
GTTTGAAAAATACCACACGTAAAGTTACTGATCTGGCATTTATTGATGTTTCAGGCCGGATTGCACGTTGTCTGATCGAC
CTGTCTTCACAGCCAGAAGCGATGATTTTGCCGAATGGCCGTCAGATTCGTATTACCCGTCAGGAAATTGGTCGCATTGT
TGGCTGTTCCCGCGAAATGGTCGGACGTGTACTAAAAACCCTGGAAGAGCAGGGCATGATCGAAACCGATGGTAAAGCCA
TCCTGATCTTTGATGCTTCATTAGAAGAAGCATCTGAAGCAGTGGCAGATGGTGCCATAGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K8USH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

47.317

87.234

0.413
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4