Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WBM82_RS02665 Genome accession   NZ_CP147494
Coordinates   425113..426063 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain YT1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 420113..431063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBM82_RS02640 (WBM82_02645) rapC 421574..422722 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  WBM82_RS02645 (WBM82_02650) phrC 422706..422828 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  WBM82_RS02650 (WBM82_02655) yczM 422928..423017 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  WBM82_RS02655 (WBM82_02660) yczN 423099..423212 (-) 114 WP_032728921.1 YjcZ family sporulation protein -
  WBM82_RS02660 (WBM82_02665) thrD 423365..424729 (-) 1365 WP_015252822.1 aspartate kinase -
  WBM82_RS02665 (WBM82_02670) ceuB 425113..426063 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  WBM82_RS02670 (WBM82_02675) yclO 426056..427003 (+) 948 WP_131227116.1 petrobactin ABC transporter permease YclO -
  WBM82_RS02675 (WBM82_02680) yclP 426997..427755 (+) 759 WP_015252819.1 petrobactin ABC transporter ATP-binding protein YclP -
  WBM82_RS02680 (WBM82_02685) yclQ 427777..428730 (+) 954 WP_015252818.1 petrobactin ABC transporter substrate-binding protein YclQ -
  WBM82_RS02685 (WBM82_02690) ycnB 428777..430195 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=946393 WBM82_RS02665 WP_014475804.1 425113..426063(+) (ceuB) [Bacillus subtilis strain YT1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=946393 WBM82_RS02665 WP_014475804.1 425113..426063(+) (ceuB) [Bacillus subtilis strain YT1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTTTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTATTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTCTAATGCTCGGGAATATTGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTGGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525