Detailed information NTG0946391

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WBM82_RS02640
• Genome accession: NZ_CP147494
• Coordinates: 421574..422722 (+)
• Length: 382 a.a.
• NCBI ID: WP_015252823.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YT1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 416574..427722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBM82_RS02620 (WBM82_02625)	yclH	416945..417625 (-)	681	WP_128480737.1	ABC transporter ATP-binding protein	-
WBM82_RS02625 (WBM82_02630)	yclI	417641..419107 (-)	1467	WP_128480738.1	ABC transporter permease	-
WBM82_RS02630 (WBM82_02635)	yclJ	419320..420003 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
WBM82_RS02635 (WBM82_02640)	yclK	419990..421411 (+)	1422	WP_134818942.1	two-component system sensor histidine kinase YclK	-
WBM82_RS02640 (WBM82_02645)	rapC	421574..422722 (+)	1149	WP_015252823.1	response regulator aspartate phosphatase RapC	Regulator
WBM82_RS02645 (WBM82_02650)	phrC	422706..422828 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WBM82_RS02650 (WBM82_02655)	yczM	422928..423017 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
WBM82_RS02655 (WBM82_02660)	yczN	423099..423212 (-)	114	WP_032728921.1	YjcZ family sporulation protein	-
WBM82_RS02660 (WBM82_02665)	thrD	423365..424729 (-)	1365	WP_015252822.1	aspartate kinase	-
WBM82_RS02665 (WBM82_02670)	ceuB	425113..426063 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
WBM82_RS02670 (WBM82_02675)	yclO	426056..427003 (+)	948	WP_131227116.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45677.71 Da
• Isoelectric Point: 5.0423

>NTDB_id=946391 WBM82_RS02640 WP_015252823.1 421574..422722(+) (rapC) [Bacillus subtilis strain YT1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=946391 WBM82_RS02640 WP_015252823.1 421574..422722(+) (rapC) [Bacillus subtilis strain YT1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCGTACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568