Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACF0HW_RS18895 Genome accession   NZ_CP171208
Coordinates   3787998..3789194 (+) Length   398 a.a.
NCBI ID   WP_012118892.1    Uniprot ID   A7ZAN8
Organism   Bacillus amyloliquefaciens strain HN11     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3782998..3794194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF0HW_RS18875 walK 3783093..3784928 (+) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  ACF0HW_RS18880 yycH 3784918..3786276 (+) 1359 WP_004393107.1 two-component system activity regulator YycH -
  ACF0HW_RS18885 - 3786263..3787102 (+) 840 WP_012118893.1 two-component system regulatory protein YycI -
  ACF0HW_RS18890 vicX 3787117..3787911 (+) 795 WP_007407895.1 MBL fold metallo-hydrolase Regulator
  ACF0HW_RS18895 htrA 3787998..3789194 (+) 1197 WP_012118892.1 S1C family serine protease Regulator
  ACF0HW_RS18900 - 3789706..3789915 (+) 210 WP_012118891.1 winged helix-turn-helix domain-containing protein -
  ACF0HW_RS18905 - 3789912..3791330 (+) 1419 WP_012118890.1 cell wall metabolism sensor histidine kinase WalK -
  ACF0HW_RS18910 - 3791562..3792569 (+) 1008 WP_023357221.1 ThiF family adenylyltransferase -
  ACF0HW_RS18915 - 3792566..3793888 (+) 1323 WP_012118888.1 ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 398 a.a.        Molecular weight: 42591.36 Da        Isoelectric Point: 6.9987

>NTDB_id=945769 ACF0HW_RS18895 WP_012118892.1 3787998..3789194(+) (htrA) [Bacillus amyloliquefaciens strain HN11]
MDYNRDDEQYASEQPRRSKRGYFLSSLIGVIVGAALMAFLLPYWTGGDHGENSKSTSQRLGSEQVKTVNVNVNDAVTNMV
SRVSDSVVGVLNIQKTDIWGEGGEAGSGSGVIYKKNGNTSYIVTNHHVIEGATEIEISLKDGSRVPAELIGSDSLMDLAV
LKVKSDKIKSAAQFGNSDQVKVGEPVIAIGNPLGLEFAGSVTQGIISGTERAVPVDSNGDGQPDWNAEVLQTDAAINPGN
SGGALMDISGKVVGINSMKIAESAVEGIGLSIPSKLVIPVIQDLEKYGEVRRPFLGIEMKSLTDIASYHWSQTLKLPKGV
KTGAVIMGVDAFSPAGKAGLKKLDVITGFDGHKVNDVVDLRERLYRKKIGDRVNITFYRSGKKKTAEVKLTEADRLQK

Nucleotide


Download         Length: 1197 bp        

>NTDB_id=945769 ACF0HW_RS18895 WP_012118892.1 3787998..3789194(+) (htrA) [Bacillus amyloliquefaciens strain HN11]
GTGGATTATAATCGCGATGATGAACAGTACGCCTCCGAACAGCCCCGCCGCAGCAAGAGAGGGTACTTTCTATCAAGTCT
GATCGGCGTCATCGTCGGGGCCGCGCTCATGGCTTTCCTGCTGCCGTACTGGACAGGCGGAGATCATGGAGAAAACAGCA
AAAGCACCAGCCAGCGTCTCGGCAGCGAACAGGTGAAAACAGTCAACGTAAATGTCAATGACGCTGTCACGAATATGGTC
AGCCGTGTATCAGATTCGGTAGTCGGCGTTCTCAATATCCAAAAGACCGATATTTGGGGAGAGGGCGGCGAAGCGGGAAG
CGGGTCGGGCGTCATTTACAAAAAGAACGGAAACACTTCTTATATCGTAACCAATCACCATGTCATTGAAGGTGCGACTG
AGATTGAGATCAGCCTGAAGGATGGCTCACGCGTGCCTGCTGAGCTGATCGGGAGCGACAGTCTGATGGATCTCGCTGTG
CTGAAGGTGAAATCTGATAAAATCAAATCGGCCGCCCAGTTCGGCAATTCCGATCAGGTCAAAGTCGGAGAACCGGTCAT
TGCGATCGGAAATCCGCTTGGGCTTGAATTTGCGGGATCAGTGACACAGGGGATCATTTCAGGCACGGAAAGGGCGGTGC
CCGTTGACTCAAACGGCGACGGACAGCCGGATTGGAATGCGGAAGTGCTGCAGACCGATGCCGCGATTAACCCCGGCAAC
AGCGGCGGCGCTTTGATGGATATATCGGGCAAGGTGGTCGGCATCAACTCAATGAAGATCGCTGAATCCGCCGTTGAAGG
GATCGGCCTGTCCATCCCGTCAAAGCTTGTCATTCCCGTTATTCAGGATTTAGAAAAATACGGAGAAGTCAGACGGCCTT
TCCTCGGTATTGAGATGAAATCCTTAACGGATATTGCGAGCTACCATTGGAGCCAGACGCTGAAACTTCCGAAAGGCGTT
AAAACCGGGGCGGTCATTATGGGTGTCGACGCGTTTTCACCGGCCGGAAAAGCGGGTTTGAAAAAGCTTGACGTAATCAC
CGGGTTCGACGGACATAAGGTCAATGACGTTGTGGATCTCCGTGAGCGCCTGTATCGCAAAAAGATCGGTGACCGTGTGA
ACATCACGTTCTACCGTTCGGGAAAGAAAAAAACAGCGGAAGTCAAACTGACAGAAGCGGATCGATTACAGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7ZAN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

43.939

99.497

0.437

  htrA Streptococcus gordonii str. Challis substr. CH1

40.052

97.236

0.389

  htrA Streptococcus mitis NCTC 12261

43.636

82.915

0.362