Detailed information NTG0945327

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WAA16_RS16600
• Genome accession: NZ_CP146984
• Coordinates: 3214482..3215657 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain S9
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3209482..3220657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAA16_RS16570 (WAA16_16570)	-	3209649..3210068 (-)	420	WP_060597396.1	TIGR03826 family flagellar region protein	-
WAA16_RS16575 (WAA16_16575)	comFC	3210125..3210811 (-)	687	WP_189288297.1	ComF family protein	Machinery gene
WAA16_RS16580 (WAA16_16580)	-	3210808..3211101 (-)	294	WP_060597398.1	competence protein ComFB	-
WAA16_RS16585 (WAA16_16585)	comFA	3211168..3212547 (-)	1380	WP_275718497.1	DEAD/DEAH box helicase	Machinery gene
WAA16_RS16590 (WAA16_16590)	-	3212668..3213510 (-)	843	WP_034660152.1	DegV family protein	-
WAA16_RS16595 (WAA16_16595)	degU	3213728..3214417 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
WAA16_RS16600 (WAA16_16600)	degS	3214482..3215657 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
WAA16_RS16605 (WAA16_16605)	-	3215879..3216547 (+)	669	WP_012011434.1	YigZ family protein	-
WAA16_RS16610 (WAA16_16610)	-	3216532..3217623 (+)	1092	WP_106048170.1	LCP family protein	-
WAA16_RS16615 (WAA16_16615)	-	3217660..3218727 (-)	1068	WP_034660156.1	MraY family glycosyltransferase	-
WAA16_RS16620 (WAA16_16620)	-	3218862..3220058 (-)	1197	WP_223253287.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=945327 WAA16_RS16600 WP_003213166.1 3214482..3215657(-) (degS) [Bacillus pumilus strain S9]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=945327 WAA16_RS16600 WP_003213166.1 3214482..3215657(-) (degS) [Bacillus pumilus strain S9]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTCGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTACAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841