Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V9W58_RS16525 Genome accession   NZ_CP146764
Coordinates   3270403..3272703 (-) Length   766 a.a.
NCBI ID   WP_174737231.1    Uniprot ID   -
Organism   Bacillus velezensis strain AP202     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3265403..3277703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W58_RS16485 (V9W58_16485) - 3265863..3266294 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  V9W58_RS16490 (V9W58_16490) - 3266294..3266635 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  V9W58_RS16495 (V9W58_16495) - 3266628..3268109 (+) 1482 WP_251248225.1 Na+/H+ antiporter subunit D -
  V9W58_RS16500 (V9W58_16500) - 3268115..3268591 (+) 477 WP_251248224.1 Na+/H+ antiporter subunit E -
  V9W58_RS16505 (V9W58_16505) - 3268591..3268875 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  V9W58_RS16510 (V9W58_16510) mnhG 3268859..3269233 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  V9W58_RS16515 (V9W58_16515) - 3269273..3269656 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  V9W58_RS16520 (V9W58_16520) comA 3269678..3270322 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  V9W58_RS16525 (V9W58_16525) comP 3270403..3272703 (-) 2301 WP_174737231.1 histidine kinase Regulator
  V9W58_RS16530 (V9W58_16530) comX 3272717..3272890 (-) 174 WP_012118314.1 competence pheromone ComX -
  V9W58_RS16535 (V9W58_16535) - 3272859..3273719 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  V9W58_RS16540 (V9W58_16540) degQ 3273927..3274067 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  V9W58_RS16545 (V9W58_16545) - 3274533..3274874 (+) 342 WP_072589519.1 hypothetical protein -
  V9W58_RS16550 (V9W58_16550) - 3274881..3276104 (-) 1224 WP_251248223.1 EAL and HDOD domain-containing protein -
  V9W58_RS16555 (V9W58_16555) - 3276234..3277700 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88369.59 Da        Isoelectric Point: 7.2212

>NTDB_id=944605 V9W58_RS16525 WP_174737231.1 3270403..3272703(-) (comP) [Bacillus velezensis strain AP202]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGF
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=944605 V9W58_RS16525 WP_174737231.1 3270403..3272703(-) (comP) [Bacillus velezensis strain AP202]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTACCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATCTAGTA
TCAATATCTCTCCTTTATTTAATAGCTCTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTATACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATTT
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.601

99.869

0.565