Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V9W59_RS14940 Genome accession   NZ_CP146762
Coordinates   2924453..2926765 (-) Length   770 a.a.
NCBI ID   WP_326161037.1    Uniprot ID   -
Organism   Bacillus safensis strain JJ1041     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2919453..2931765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W59_RS14900 (V9W59_14900) - 2919857..2920288 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  V9W59_RS14905 (V9W59_14905) - 2920288..2920629 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  V9W59_RS14910 (V9W59_14910) - 2920622..2922100 (+) 1479 WP_024423317.1 Na+/H+ antiporter subunit D -
  V9W59_RS14915 (V9W59_14915) - 2922107..2922586 (+) 480 WP_024423318.1 Na+/H+ antiporter subunit E -
  V9W59_RS14920 (V9W59_14920) - 2922586..2922867 (+) 282 WP_024423319.1 Na(+)/H(+) antiporter subunit F1 -
  V9W59_RS14925 (V9W59_14925) mnhG 2922851..2923225 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  V9W59_RS14930 (V9W59_14930) - 2923318..2923707 (-) 390 WP_335343511.1 hotdog fold thioesterase -
  V9W59_RS14935 (V9W59_14935) comA 2923731..2924372 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  V9W59_RS14940 (V9W59_14940) comP 2924453..2926765 (-) 2313 WP_326161037.1 ATP-binding protein Regulator
  V9W59_RS14945 (V9W59_14945) comX 2926823..2926990 (-) 168 WP_080696376.1 competence pheromone ComX -
  V9W59_RS14950 (V9W59_14950) - 2926987..2927901 (-) 915 WP_135032741.1 polyprenyl synthetase family protein -
  V9W59_RS14955 (V9W59_14955) degQ 2928053..2928193 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  V9W59_RS14960 (V9W59_14960) - 2928699..2929055 (+) 357 WP_052503035.1 hypothetical protein -
  V9W59_RS14965 (V9W59_14965) - 2929091..2930317 (-) 1227 WP_024423326.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89334.01 Da        Isoelectric Point: 8.4027

>NTDB_id=944456 V9W59_RS14940 WP_326161037.1 2924453..2926765(-) (comP) [Bacillus safensis strain JJ1041]
MKLTYTKLSTFLVFLSFLFVIYISYIYVFDIFNGARVEKNENGQTEVVDVEYLSLAYSSGLKEGDIILKINGQSNLIQDH
MINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFIYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICVGY
LSAGTSGIGDRFSHYVLLLCLSSVSILYIHFIYQYFKEFDVHLTNPKLIRCLYLIPIFNLAVHSGVSVSSELRKYVPSIS
LLFFFGTVLVALYLIVRGMKRYKKTAHGSVLKFFAIINVLSFSPFILFFVIPYVFFDKYLINPFILTSIVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYIILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILDEVGKI
IALDKGFMMKIGERGGHSFVICCLSNLRTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=944456 V9W59_RS14940 WP_326161037.1 2924453..2926765(-) (comP) [Bacillus safensis strain JJ1041]
ATGAAGCTTACCTATACAAAATTGTCCACATTTCTTGTGTTTTTGTCTTTTTTATTTGTGATCTATATTTCATATATCTA
TGTATTTGATATTTTTAATGGTGCACGTGTAGAAAAGAATGAAAATGGTCAAACGGAAGTTGTTGACGTTGAATATCTTT
CTTTAGCTTATTCGTCAGGGTTAAAAGAAGGAGATATTATTTTAAAAATAAACGGACAATCTAATTTAATTCAAGATCAT
ATGATTAATGGTAAGCTTAGAAATGTACAAAGAATTGATATTCAAAGAGGAAACCAAATTATATCACTTAAAAATAAAAC
ATTGATTGGTCGAGAAAGCTTATTTATCTATTTAATCCCTCTTCTTCTATATTCAATATGCTTATTCTGTATCTTTTTTA
TTATTAAAATCAACAAAGAGCCGCAACGAAAATCTGCATTTTTATTAATTTTATTCTTATTGTCAATTTGTGTTGGATAT
CTGAGTGCAGGCACTTCAGGAATTGGTGATAGATTTAGCCATTATGTTCTCTTATTGTGTTTATCGAGTGTATCCATCTT
ATATATTCATTTTATCTATCAATACTTCAAAGAATTTGATGTGCACTTAACGAACCCAAAACTAATCAGATGCTTATACT
TGATACCTATTTTTAATCTTGCAGTACATAGTGGAGTTTCGGTGTCATCTGAATTGAGAAAATATGTTCCAAGCATCAGT
TTGCTGTTTTTTTTCGGAACAGTTTTAGTAGCACTTTATTTAATAGTCAGAGGCATGAAGAGATATAAAAAAACAGCACA
TGGTTCAGTTTTAAAGTTTTTTGCTATTATAAATGTTTTGTCGTTCAGTCCATTTATTTTATTTTTCGTTATTCCCTATG
TATTTTTTGATAAGTATTTGATTAATCCTTTTATCCTGACGTCTATCGTTTTGTTAATTCCTTTTTCACTCGTGTACCAA
TTTATGACGAACAAACTTTACAATATGGATTTTCTAATTAGTAGACTGAGATACTATGGCTTTCTAGCCATTACACCAAC
CATTTTCGTTGTAGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACTT
ATACTCTCATGCTGGCTGTTTTTTATTTCAAAGAAATTCTAGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCAT
AATTATCAGGATAGTGTATTTAAATTTACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAA
ATACATCATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTG
ATGAATCAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGATCAATTTCAAGATATATTAGATGAAGTTGGAAAAATC
ATCGCGCTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTT
ACGGACACCAAAATTGTCGCGTGATGAGATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATG
TTGTTAAAATCGAAGAATTGATGGAGCATCTTGATGATTTGAAACAGCGCGAGGCCAATCCTGCATGGCTGAAGAAAATC
ATGTTTGCTATGGAAGAAAAGCAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACT
AAAAAGGCAGTCGGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCGACATCTATTGAAAATTCGCTTATCTCAT
GGAATGATCAAATGTCCAAAGTGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGCCCGCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCGCCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAGCTAAATATTTACCGAATTGTTCAGGAGCTGTTATCCAACGCCC
TGAAGCACTCAAAAGCCACTCAAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCCAGTCATCTTGATCAGCACACAATGAGCATGGGGCTATCGGGAATTAGAGAACGAGTGAAAGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.387

100

0.487