Detailed information NTG0944338

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V9W63_RS16625
• Genome accession: NZ_CP146760
• Coordinates: 3391356..3392519 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ334
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3386356..3397519

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9W63_RS16595 (V9W63_16595)	-	3386620..3387039 (-)	420	WP_007407479.1	TIGR03826 family flagellar region protein	-
V9W63_RS16600 (V9W63_16600)	comFC	3387113..3387802 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
V9W63_RS16605 (V9W63_16605)	-	3387808..3388092 (-)	285	WP_007407481.1	competence protein ComFB	-
V9W63_RS16610 (V9W63_16610)	comFA	3388150..3389535 (-)	1386	WP_007407482.1	DEAD/DEAH box helicase	Machinery gene
V9W63_RS16615 (V9W63_16615)	-	3389644..3390492 (-)	849	WP_007407483.1	DegV family protein	-
V9W63_RS16620 (V9W63_16620)	degU	3390590..3391279 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V9W63_RS16625 (V9W63_16625)	degS	3391356..3392519 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
V9W63_RS16630 (V9W63_16630)	-	3392742..3393389 (+)	648	WP_007407485.1	YigZ family protein	-
V9W63_RS16635 (V9W63_16635)	-	3393394..3394575 (+)	1182	WP_338683763.1	LCP family protein	-
V9W63_RS16640 (V9W63_16640)	-	3394674..3395750 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
V9W63_RS16645 (V9W63_16645)	-	3395883..3397079 (-)	1197	WP_237436628.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=944338 V9W63_RS16625 WP_007407484.1 3391356..3392519(-) (degS) [Bacillus velezensis strain JJ334]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=944338 V9W63_RS16625 WP_007407484.1 3391356..3392519(-) (degS) [Bacillus velezensis strain JJ334]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951