Detailed information NTG0942762

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V6986_RS16225
• Genome accession: NZ_CP146358
• Coordinates: 3176952..3178127 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain yw6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3171952..3183127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6986_RS16195 (V6986_16195)	-	3172119..3172538 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
V6986_RS16200 (V6986_16200)	-	3172595..3173281 (-)	687	WP_338592981.1	ComF family protein	-
V6986_RS16205 (V6986_16205)	-	3173278..3173571 (-)	294	WP_039181811.1	competence protein ComFB	-
V6986_RS16210 (V6986_16210)	comFA	3173621..3175018 (-)	1398	WP_143252282.1	DEAD/DEAH box helicase	Machinery gene
V6986_RS16215 (V6986_16215)	-	3175139..3175981 (-)	843	WP_039181815.1	DegV family protein	-
V6986_RS16220 (V6986_16220)	degU	3176198..3176887 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
V6986_RS16225 (V6986_16225)	degS	3176952..3178127 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
V6986_RS16230 (V6986_16230)	-	3178349..3179017 (+)	669	WP_012011434.1	YigZ family protein	-
V6986_RS16235 (V6986_16235)	-	3179002..3180093 (+)	1092	WP_338592989.1	LCP family protein	-
V6986_RS16240 (V6986_16240)	-	3180129..3181196 (-)	1068	WP_034660156.1	MraY family glycosyltransferase	-
V6986_RS16245 (V6986_16245)	-	3181331..3182527 (-)	1197	WP_338595130.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=942762 V6986_RS16225 WP_003213166.1 3176952..3178127(-) (degS) [Bacillus safensis strain yw6]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=942762 V6986_RS16225 WP_003213166.1 3176952..3178127(-) (degS) [Bacillus safensis strain yw6]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAGGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTACTAAGCTTGCAAGACGTCATAGAAC
GCTCTGAAACCCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTTAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCAACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCCC
TGTTTAGACTAGCCCAAGAAGCTGTTACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATTTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACATTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCGCTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841