Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   V6U69_RS08110 Genome accession   NZ_CP145867
Coordinates   1779614..1780057 (-) Length   147 a.a.
NCBI ID   WP_002890101.1    Uniprot ID   J7TQ97
Organism   Streptococcus salivarius strain KSS10     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1774614..1785057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS08095 (V6U69_08095) - 1775297..1775920 (-) 624 WP_410533645.1 GNAT family N-acetyltransferase -
  V6U69_RS08100 (V6U69_08100) rcrQ 1776028..1777806 (-) 1779 WP_410533647.1 ABC transporter ATP-binding protein Regulator
  V6U69_RS08105 (V6U69_08105) rcrP 1777796..1779610 (-) 1815 WP_410533649.1 ABC transporter ATP-binding protein Regulator
  V6U69_RS08110 (V6U69_08110) rcrR 1779614..1780057 (-) 444 WP_002890101.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V6U69_RS08115 (V6U69_08115) - 1780246..1780656 (-) 411 WP_002886693.1 peptide deformylase -
  V6U69_RS08120 (V6U69_08120) - 1780813..1782147 (-) 1335 WP_410533651.1 YfhO family protein -
  V6U69_RS08125 (V6U69_08125) gdhA 1782640..1783992 (-) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17069.51 Da        Isoelectric Point: 9.6395

>NTDB_id=940800 V6U69_RS08110 WP_002890101.1 1779614..1780057(-) (rcrR) [Streptococcus salivarius strain KSS10]
MHGKDPFSDFREIINAMESRVQELGKVHGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKRLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAKDVGHFREAIHEQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=940800 V6U69_RS08110 WP_002890101.1 1779614..1780057(-) (rcrR) [Streptococcus salivarius strain KSS10]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAAATCATCAATGCTATGGAATCTCGCGTGCAAGAGTTAGGGAAGGT
CCACGGTGTTGAACATTTAGCCGGCCCACAAGGATTTGCTGTCAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATCGAGAAAAGACTATCTATTTCCAAGTCTGTGGCTAGTAATCTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTGGGTAAAAAGAAGGCCAAAGA
TGTTGGACATTTCCGAGAGGCTATCCATGAACAGTTGTTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCCTTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7TQ97

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558