Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   V6U69_RS07045 Genome accession   NZ_CP145867
Coordinates   1545134..1546135 (-) Length   333 a.a.
NCBI ID   WP_022496011.1    Uniprot ID   A0AB33ZDI0
Organism   Streptococcus salivarius strain KSS10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1540134..1551135
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS07020 (V6U69_07020) - 1540549..1540734 (+) 186 WP_002890454.1 hypothetical protein -
  V6U69_RS07025 (V6U69_07025) eno 1540883..1542187 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  V6U69_RS07030 (V6U69_07030) - 1542393..1542848 (+) 456 WP_064523269.1 YueI family protein -
  V6U69_RS07035 (V6U69_07035) - 1542879..1543994 (-) 1116 WP_064523266.1 glycerate kinase -
  V6U69_RS07040 (V6U69_07040) - 1544007..1545074 (-) 1068 WP_410533519.1 MmcQ/YjbR family DNA-binding protein -
  V6U69_RS07045 (V6U69_07045) ccpA 1545134..1546135 (-) 1002 WP_022496011.1 catabolite control protein A Regulator
  V6U69_RS07050 (V6U69_07050) - 1546450..1547532 (+) 1083 WP_410533521.1 M24 family metallopeptidase -
  V6U69_RS07055 (V6U69_07055) - 1547695..1548824 (+) 1130 WP_231087377.1 IS3 family transposase -
  V6U69_RS07060 (V6U69_07060) - 1548881..1549249 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  V6U69_RS07065 (V6U69_07065) - 1549251..1550657 (-) 1407 WP_410533523.1 Cof-type HAD-IIB family hydrolase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36660.58 Da        Isoelectric Point: 5.4827

>NTDB_id=940792 V6U69_RS07045 WP_022496011.1 1545134..1546135(-) (ccpA) [Streptococcus salivarius strain KSS10]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSITQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=940792 V6U69_RS07045 WP_022496011.1 1545134..1546135(-) (ccpA) [Streptococcus salivarius strain KSS10]
ATGAATACTGATGAAACAATCACTATTTATGACGTTGCGCGTGAGGCAGGCGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTATCGTCCAAATG
CGGTTGCACGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATTCCAAATATTGCAAATAGCTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACGATGTACAAGTACAATATTGTACTTGCTTCTAGTGATGAAAATGACGA
TCACGAAGTTACTGTGATTAACTCTCTATTTGCCAAACAAGTAGATGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCAATTGTTCTAGCAGGAACAGTGGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCTGTTGAGGATTCTATAACACAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCGCTTATCGATGATATTAATGGTAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCTACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGATTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCATGGTCTTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553