Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U69_RS05535 Genome accession   NZ_CP145867
Coordinates   1226824..1227636 (-) Length   270 a.a.
NCBI ID   WP_155198601.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221824..1232636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS05505 (V6U69_05505) - 1222104..1222490 (-) 387 WP_060972357.1 DUF1934 domain-containing protein -
  V6U69_RS05510 (V6U69_05510) - 1222521..1223279 (-) 759 WP_073689959.1 nucleoside phosphorylase -
  V6U69_RS05515 (V6U69_05515) - 1223292..1224149 (-) 858 WP_173018075.1 GNAT family N-acetyltransferase -
  V6U69_RS05520 (V6U69_05520) yidA 1224328..1225137 (+) 810 WP_002890845.1 sugar-phosphatase -
  V6U69_RS05525 (V6U69_05525) - 1225139..1226353 (+) 1215 WP_155198602.1 aminoacyltransferase -
  V6U69_RS05530 (V6U69_05530) - 1226405..1226764 (-) 360 WP_037597735.1 YbaN family protein -
  V6U69_RS05535 (V6U69_05535) vicX 1226824..1227636 (-) 813 WP_155198601.1 MBL fold metallo-hydrolase Regulator
  V6U69_RS05540 (V6U69_05540) vicK 1227642..1228982 (-) 1341 WP_410532015.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U69_RS05545 (V6U69_05545) vicR 1228975..1229682 (-) 708 WP_037600497.1 response regulator YycF Regulator
  V6U69_RS05550 (V6U69_05550) - 1229968..1230735 (+) 768 Protein_1078 amino acid ABC transporter ATP-binding protein -
  V6U69_RS05555 (V6U69_05555) - 1230745..1231578 (+) 834 WP_155198614.1 transporter substrate-binding domain-containing protein -
  V6U69_RS05560 (V6U69_05560) - 1231596..1232294 (+) 699 WP_084871397.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30106.99 Da        Isoelectric Point: 5.3499

>NTDB_id=940786 V6U69_RS05535 WP_155198601.1 1226824..1227636(-) (vicX) [Streptococcus salivarius strain KSS10]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVFDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940786 V6U69_RS05535 WP_155198601.1 1226824..1227636(-) (vicX) [Streptococcus salivarius strain KSS10]
ATGACCTCAGATTTAGGATTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAGACTCCAGA
AAAGAAGATTCTTGTGGACGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAAATCGATCGTGATCCGAGTG
ATCTGGATGCTATCTTAGTTACTCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAGGATGGAAAAAGTTTTGTAATGCTGACGGATACGGGTTATGTTTCTGATCGCATGGCA
GGTATTATTGAGAATGCTGATGGCTATCTGATTGAGTCCAATCATGATATTGAAATCCTCAGGGCAGGTTCATATCCTTG
GTCGACTAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATAG
GTAACAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGCTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAGGTTTTTGATACCTCACCAGACACAGCGACACCACT
CACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767