Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U68_RS04685 Genome accession   NZ_CP145866
Coordinates   948389..949201 (+) Length   270 a.a.
NCBI ID   WP_155198601.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 943389..954201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS04660 (V6U68_04650) - 943731..944429 (-) 699 WP_347093264.1 amino acid ABC transporter permease -
  V6U68_RS04665 (V6U68_04655) - 944447..945280 (-) 834 WP_410532014.1 transporter substrate-binding domain-containing protein -
  V6U68_RS04670 (V6U68_04660) - 945290..946057 (-) 768 WP_301354528.1 amino acid ABC transporter ATP-binding protein -
  V6U68_RS04675 (V6U68_04665) vicR 946343..947050 (+) 708 WP_037600497.1 response regulator YycF Regulator
  V6U68_RS04680 (V6U68_04670) vicK 947043..948383 (+) 1341 WP_410532015.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U68_RS04685 (V6U68_04675) vicX 948389..949201 (+) 813 WP_155198601.1 MBL fold metallo-hydrolase Regulator
  V6U68_RS04690 (V6U68_04680) - 949261..949620 (+) 360 WP_410532016.1 YbaN family protein -
  V6U68_RS04695 (V6U68_04685) - 949672..950886 (-) 1215 WP_410532017.1 aminoacyltransferase -
  V6U68_RS04700 (V6U68_04690) yidA 950888..951697 (-) 810 WP_002890845.1 sugar-phosphatase -
  V6U68_RS04705 (V6U68_04695) - 951876..952742 (+) 867 WP_410532018.1 GNAT family N-acetyltransferase -
  V6U68_RS04710 (V6U68_04700) - 952747..953511 (+) 765 WP_347111512.1 nucleoside phosphorylase -
  V6U68_RS04715 (V6U68_04705) - 953536..953922 (+) 387 WP_410532019.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30106.99 Da        Isoelectric Point: 5.3499

>NTDB_id=940717 V6U68_RS04685 WP_155198601.1 948389..949201(+) (vicX) [Streptococcus salivarius strain KSS9]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVFDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940717 V6U68_RS04685 WP_155198601.1 948389..949201(+) (vicX) [Streptococcus salivarius strain KSS9]
ATGACCTCAGATTTAGGATTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAGACTCCAGA
AAAGAAGATTCTTGTGGACGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAAATCGATCGTGATCCGAGTG
ATCTGGATGCTATCTTAGTTACTCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAGGATGGAAAAAGTTTTGTAATGCTGACGGATACGGGTTATGTTTCTGATCGCATGGCA
GGTATTATTGAGAATGCTGATGGCTATCTGATTGAGTCCAATCATGATATTGAAATCCTCAGGGCAGGTTCATATCCTTG
GTCGACTAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATAG
GTAACAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGCTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAGGTTTTTGATACCTCACCAGACACAGCGACACCACT
CACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767