Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U67_RS04635 Genome accession   NZ_CP145865
Coordinates   947000..947812 (+) Length   270 a.a.
NCBI ID   WP_022496320.1    Uniprot ID   A0AB33ZCS3
Organism   Streptococcus salivarius strain KSS8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 942000..952812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS04610 (V6U67_04610) - 942328..943026 (-) 699 WP_002886251.1 amino acid ABC transporter permease -
  V6U67_RS04615 (V6U67_04615) - 943044..943877 (-) 834 WP_037611665.1 transporter substrate-binding domain-containing protein -
  V6U67_RS04620 (V6U67_04620) - 943887..944654 (-) 768 WP_037611663.1 amino acid ABC transporter ATP-binding protein -
  V6U67_RS04625 (V6U67_04625) vicR 944954..945661 (+) 708 WP_002884978.1 response regulator YycF Regulator
  V6U67_RS04630 (V6U67_04630) vicK 945654..946994 (+) 1341 WP_022496319.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U67_RS04635 (V6U67_04635) vicX 947000..947812 (+) 813 WP_022496320.1 MBL fold metallo-hydrolase Regulator
  V6U67_RS04640 (V6U67_04640) - 947871..948230 (+) 360 WP_037611660.1 YbaN family protein -
  V6U67_RS04645 (V6U67_04645) - 948282..949496 (-) 1215 WP_037611659.1 aminoacyltransferase -
  V6U67_RS04650 (V6U67_04650) yidA 949498..950307 (-) 810 WP_002890845.1 sugar-phosphatase -
  V6U67_RS04655 (V6U67_04655) - 950485..951351 (+) 867 WP_022495838.1 GNAT family N-acetyltransferase -
  V6U67_RS04660 (V6U67_04660) - 951433..951819 (+) 387 WP_002890847.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=940647 V6U67_RS04635 WP_022496320.1 947000..947812(+) (vicX) [Streptococcus salivarius strain KSS8]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940647 V6U67_RS04635 WP_022496320.1 947000..947812(+) (vicX) [Streptococcus salivarius strain KSS8]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGCGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGACAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTTATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGACGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763