Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   V6U66_RS07380 Genome accession   NZ_CP145864
Coordinates   1601495..1602496 (-) Length   333 a.a.
NCBI ID   WP_022496011.1    Uniprot ID   A0AB33ZDI0
Organism   Streptococcus salivarius strain KSS7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1596495..1607496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS07355 (V6U66_07345) - 1596904..1597089 (+) 186 WP_002886071.1 hypothetical protein -
  V6U66_RS07360 (V6U66_07350) eno 1597243..1598547 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  V6U66_RS07365 (V6U66_07355) - 1598753..1599208 (+) 456 WP_049528980.1 YueI family protein -
  V6U66_RS07370 (V6U66_07360) - 1599239..1600354 (-) 1116 WP_221739317.1 glycerate kinase -
  V6U66_RS07375 (V6U66_07365) - 1600367..1601434 (-) 1068 WP_045769010.1 MmcQ/YjbR family DNA-binding protein -
  V6U66_RS07380 (V6U66_07370) ccpA 1601495..1602496 (-) 1002 WP_022496011.1 catabolite control protein A Regulator
  V6U66_RS07385 (V6U66_07375) - 1602809..1603894 (+) 1086 WP_410534436.1 M24 family metallopeptidase -
  V6U66_RS07390 (V6U66_07380) - 1603994..1604362 (-) 369 WP_221739316.1 S1 RNA-binding domain-containing protein -
  V6U66_RS07395 (V6U66_07385) - 1604364..1605770 (-) 1407 WP_045771870.1 Cof-type HAD-IIB family hydrolase -
  V6U66_RS07400 (V6U66_07390) smpB 1605917..1606381 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36660.58 Da        Isoelectric Point: 5.4827

>NTDB_id=940590 V6U66_RS07380 WP_022496011.1 1601495..1602496(-) (ccpA) [Streptococcus salivarius strain KSS7]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSITQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=940590 V6U66_RS07380 WP_022496011.1 1601495..1602496(-) (ccpA) [Streptococcus salivarius strain KSS7]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACCATGTACAAGTATAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTCCTAGCAGGAACTGTGGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTATAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGACGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCCGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTCTTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553