Detailed information NTG0939710

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V6D45_RS17945
• Genome accession: NZ_CP145722
• Coordinates: 3532289..3533446 (-)
• Length: 385 a.a.
• NCBI ID: WP_338443307.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain kcgeb_S11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3527289..3538446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6D45_RS17915 (V6D45_17920)	-	3527542..3527961 (-)	420	WP_338443305.1	TIGR03826 family flagellar region protein	-
V6D45_RS17920 (V6D45_17925)	comFC	3528034..3528756 (-)	723	WP_338443306.1	ComF family protein	Machinery gene
V6D45_RS17925 (V6D45_17930)	-	3528720..3529016 (-)	297	WP_014115352.1	competence protein ComFB	-
V6D45_RS17930 (V6D45_17935)	comFA	3529085..3530467 (-)	1383	WP_338444548.1	ATP-dependent helicase ComFA	Machinery gene
V6D45_RS17935 (V6D45_17940)	-	3530574..3531419 (-)	846	WP_014115354.1	DegV family protein	-
V6D45_RS17940 (V6D45_17945)	degU	3531517..3532206 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
V6D45_RS17945 (V6D45_17950)	degS	3532289..3533446 (-)	1158	WP_338443307.1	two-component sensor histidine kinase DegS	Regulator
V6D45_RS17950 (V6D45_17955)	-	3533662..3534315 (+)	654	WP_061186930.1	YigZ family protein	-
V6D45_RS17955 (V6D45_17960)	-	3534315..3535439 (+)	1125	WP_338443308.1	LCP family protein	-
V6D45_RS17960 (V6D45_17965)	-	3535522..3536598 (-)	1077	WP_061186932.1	MraY family glycosyltransferase	-
V6D45_RS17965 (V6D45_17970)	-	3536743..3537936 (-)	1194	WP_338444549.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 45005.82 Da
• Isoelectric Point: 6.2957

>NTDB_id=939710 V6D45_RS17945 WP_338443307.1 3532289..3533446(-) (degS) [Bacillus spizizenii strain kcgeb_S11]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQMRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=939710 V6D45_RS17945 WP_338443307.1 3532289..3533446(-) (degS) [Bacillus spizizenii strain kcgeb_S11]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAGCTGAAACAAATTAAACAGCAGG
TGTATGAAGTTATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGGTTCAGTGAAGAAGAAATCCGCAATGCTTACGAAAAAGCCCATAAACTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAAATGCGGGAACGCCGGGATGATTTAGAGCGAAGATTGTTAGGCCTTCAGGAAATCATTGAGC
GGTCTGAATCATTAGTAAGCCAAATAACAGTTGTGCTTAACTACTTGAATCAGGATTTGCGCGAGGTCGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCACAGGAAGAAGAGCGAAAAAGAGTCTCCAGAGA
AATTCATGACGGACCTGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTACTGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTGCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGTGAAACAGAGGATCAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGAAAAGGGTTCGACTTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATCTATTGGAAGGAACCATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.481	100	0.995