Detailed information NTG0939709

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACEW9Q_RS19845
• Genome accession: NZ_CP169569
• Coordinates: 4045277..4046302 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MC1061
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4040277..4051302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEW9Q_RS19815 (ACEW9Q_19815)	zapB	4040361..4040606 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACEW9Q_RS19820 (ACEW9Q_19820)	rraA	4040691..4041176 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACEW9Q_RS19825 (ACEW9Q_19825)	menA	4041269..4042195 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACEW9Q_RS19830 (ACEW9Q_19830)	hslU	4042262..4043593 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACEW9Q_RS19835 (ACEW9Q_19835)	hslV	4043603..4044133 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACEW9Q_RS19840 (ACEW9Q_19840)	ftsN	4044226..4045185 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACEW9Q_RS19845 (ACEW9Q_19845)	cytR	4045277..4046302 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACEW9Q_RS19850 (ACEW9Q_19850)	priA	4046458..4048656 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACEW9Q_RS19855 (ACEW9Q_19855)	rpmE	4048859..4049071 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACEW9Q_RS19860 (ACEW9Q_19860)	yiiX	4049132..4049740 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACEW9Q_RS19865 (ACEW9Q_19865)	metJ	4049924..4050241 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=939709 ACEW9Q_RS19845 WP_000644904.1 4045277..4046302(-) (cytR) [Escherichia coli strain MC1061]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=939709 ACEW9Q_RS19845 WP_000644904.1 4045277..4046302(-) (cytR) [Escherichia coli strain MC1061]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628