Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   OO714_RS15315 Genome accession   NZ_AP025740
Coordinates   3241284..3241694 (-) Length   136 a.a.
NCBI ID   WP_001200144.1    Uniprot ID   A0A6F8TJU0
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3236284..3246694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OO714_RS15285 (KAMO5_30380) - 3236370..3236639 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  OO714_RS15290 (KAMO5_30390) rapZ 3236636..3237487 (-) 852 WP_000821671.1 RNase adapter RapZ -
  OO714_RS15295 (KAMO5_30400) panC 3237510..3238358 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  OO714_RS15300 (KAMO5_30410) panB 3238362..3239171 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  OO714_RS15305 (KAMO5_30420) folK 3239217..3239699 (-) 483 WP_000219224.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  OO714_RS15310 (KAMO5_30430) pcnB 3239696..3241159 (-) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  OO714_RS15315 (KAMO5_30440) comEA 3241284..3241694 (-) 411 WP_001200144.1 ComEA family DNA-binding protein Machinery gene
  OO714_RS15320 (KAMO5_30450) mazG 3241663..3242469 (-) 807 WP_000359488.1 nucleoside triphosphate pyrophosphohydrolase -
  OO714_RS15325 (KAMO5_30460) - 3242581..3243354 (+) 774 WP_000682841.1 SDR family oxidoreductase -
  OO714_RS15330 (KAMO5_30470) - 3243399..3245705 (-) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15747.09 Da        Isoelectric Point: 10.4475

>NTDB_id=93881 OO714_RS15315 WP_001200144.1 3241284..3241694(-) (comEA) [Acinetobacter baumannii strain ATCC 19606]
MQYSMRFWKNKYFILIMLCLGVVSPSVYAQSFDQNFQEWKAKQQMYDQKLKITKSSHSNGSKISQTKNFNDFTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=93881 OO714_RS15315 WP_001200144.1 3241284..3241694(-) (comEA) [Acinetobacter baumannii strain ATCC 19606]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTATTTTAATAATGTTGTGCTTGGGAGTAGTTTCACCTTCAGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAAGATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTTTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6F8TJU0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963

  comEA Acinetobacter baumannii D1279779

93.382

100

0.934

  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404


Multiple sequence alignment