Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V5F86_RS15865 Genome accession   NZ_CP145137
Coordinates   3110731..3113037 (-) Length   768 a.a.
NCBI ID   WP_268392280.1    Uniprot ID   A0A9Q4HIC0
Organism   Bacillus spizizenii strain kcgeb_sc     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3105731..3118037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5F86_RS15825 (V5F86_15830) - 3106200..3106631 (+) 432 WP_014114977.1 Na(+)/H(+) antiporter subunit B -
  V5F86_RS15830 (V5F86_15835) - 3106631..3106972 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  V5F86_RS15835 (V5F86_15840) - 3106965..3108446 (+) 1482 WP_268392284.1 Na+/H+ antiporter subunit D -
  V5F86_RS15840 (V5F86_15845) - 3108452..3108928 (+) 477 WP_014114979.1 Na+/H+ antiporter subunit E -
  V5F86_RS15845 (V5F86_15850) - 3108928..3109212 (+) 285 WP_014114980.1 Na(+)/H(+) antiporter subunit F1 -
  V5F86_RS15850 (V5F86_15855) mnhG 3109196..3109570 (+) 375 WP_014114981.1 monovalent cation/H(+) antiporter subunit G -
  V5F86_RS15855 (V5F86_15860) - 3109609..3109989 (-) 381 WP_003220719.1 hotdog fold thioesterase -
  V5F86_RS15860 (V5F86_15865) comA 3110006..3110650 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  V5F86_RS15865 (V5F86_15870) comP 3110731..3113037 (-) 2307 WP_268392280.1 two-component system sensor histidine kinase ComP Regulator
  V5F86_RS15870 (V5F86_15875) comX 3113052..3113225 (-) 174 WP_268392278.1 competence pheromone ComX -
  V5F86_RS15875 (V5F86_15880) comQ 3113240..3114106 (-) 867 WP_268392274.1 polyprenyl synthetase family protein Regulator
  V5F86_RS15880 (V5F86_15885) degQ 3114291..3114431 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  V5F86_RS15885 (V5F86_15890) - 3114653..3114778 (+) 126 WP_014114985.1 hypothetical protein -
  V5F86_RS15890 (V5F86_15895) - 3114893..3115261 (+) 369 WP_268454380.1 hypothetical protein -
  V5F86_RS15895 (V5F86_15900) pdeH 3115237..3116466 (-) 1230 WP_338443149.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88895.93 Da        Isoelectric Point: 7.7309

>NTDB_id=937439 V5F86_RS15865 WP_268392280.1 3110731..3113037(-) (comP) [Bacillus spizizenii strain kcgeb_sc]
MKKLSKQITNLFILLSVIYVCYINYINLNGIIIGTEIIKTEENQYKIGEMTETSYGKFVGLKQGDLIVKINKEKPSEKNL
KGNNLYHIRSLDVMRDGKSLHLDDFDIVNLNGSYSYFLTVLPLVFYCLSLVCIFYVLKVSKIRKSFAGYVLILFLLDVAI
AYMSAGGPARGHEFNRYINLFTFISSPIFYLKFIQEYFKELGKKFANSLVSFLYIIPILNIVIELFHRYFPQDFITNLNL
VSFFFVTVSGFILVFFHLYKYKYSEHAYILKILILTNTLSFAPFLVFYVVPTILTGNYIFDALSSASLLSLIPFGLVYQF
VANKMFDIEFILGRMRYYALLALIPTLFIVGALALFDSFNIQMSPARQTVFIFVVMFAVFYFKEVIDFKFRLKRFSEKFN
YQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDQKVIYLDKPEIGPDWHLFQKEFENVTSEIGKIIE
VNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLMF
AIEEKQRSGLARDLHDSVLQDLISLKRQCELFLADFKKDNNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGV
GFDQEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=937439 V5F86_RS15865 WP_268392280.1 3110731..3113037(-) (comP) [Bacillus spizizenii strain kcgeb_sc]
TTGAAAAAATTATCAAAGCAAATTACAAATCTTTTCATTTTATTGAGTGTTATATATGTTTGCTATATCAACTATATTAA
TTTAAACGGAATTATTATTGGTACTGAGATTATTAAAACTGAGGAAAATCAATATAAAATTGGTGAGATGACAGAAACTT
CATATGGGAAGTTTGTGGGATTAAAGCAAGGAGATCTCATTGTCAAAATAAACAAAGAAAAACCATCAGAAAAGAATTTA
AAAGGGAATAACTTGTATCATATCAGAAGTTTAGATGTAATGAGAGACGGTAAATCATTGCATTTAGATGACTTTGATAT
CGTTAATTTAAACGGGTCTTATAGTTATTTCCTTACTGTACTTCCTCTTGTCTTTTATTGTCTAAGTTTAGTGTGCATAT
TTTATGTACTAAAAGTCAGCAAGATAAGAAAATCATTTGCGGGATATGTATTAATTTTATTTTTATTAGATGTCGCTATT
GCATATATGAGTGCAGGAGGACCAGCTAGAGGACATGAATTTAATAGATATATCAATCTATTTACTTTCATTTCTTCTCC
GATTTTCTACCTGAAATTTATTCAAGAATATTTTAAAGAATTAGGAAAGAAATTTGCAAATTCATTAGTTTCTTTTCTGT
ACATTATACCAATATTAAATATTGTTATTGAGCTTTTTCATCGTTATTTTCCCCAAGATTTTATAACAAACTTAAATCTG
GTGTCATTTTTCTTTGTAACCGTTTCGGGATTTATTTTGGTTTTCTTTCATCTCTATAAATATAAATATTCTGAACATGC
TTATATTCTAAAAATATTAATACTAACAAATACTCTTTCTTTTGCGCCTTTTTTAGTTTTTTATGTTGTTCCAACAATTC
TGACAGGTAATTATATATTTGATGCATTATCTTCTGCTTCTTTACTTTCACTCATTCCATTTGGTTTAGTCTATCAATTT
GTAGCGAATAAAATGTTCGATATTGAATTTATACTAGGCAGAATGAGATACTATGCTCTACTTGCATTGATACCAACATT
ATTTATCGTTGGAGCATTAGCTTTATTTGATTCATTTAACATACAAATGAGTCCAGCACGCCAAACTGTATTTATTTTTG
TTGTCATGTTCGCTGTCTTCTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTCAAC
TATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGGGGGGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAAAAA
TACTATTTTGGATGTTTTACTTGTAAGCAAAGCCTATACCTTTGAAGTAACTCCTGATCAAAAAGTGATATATTTAGATA
AGCCGGAAATTGGACCAGATTGGCATCTTTTTCAAAAGGAATTTGAAAACGTAACTTCAGAAATTGGGAAAATTATTGAA
GTCAATCAGGGATTTCTAATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAACAC
TCCTCGGCTAACACGGGATGAAATATCTTGGCTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCCTGC
ATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAGCAAGAGGGAACCAACCCGATATGGCTGAAAAAGCTAATGTTT
GCAATCGAAGAAAAACAACGTTCAGGGCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAAGCG
CCAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATAATAATCCGTGTCAGGAAGAGGTACAGGACAAGCTTGTACAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTT
GGGCTGGTGAAGGCGCTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAG
ATTTACGGCTTCGCTTGATCTGGATTCGCAGTTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGC
ACTCCCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTA
GGGTTTGATCAAGAAAAAAATAATGAGCATTCCATGAGTATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGA
TGGACGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

81.948

100

0.822