Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | ACEPM3_RS13470 | Genome accession | NZ_CP168727 |
| Coordinates | 2836955..2837575 (+) | Length | 206 a.a. |
| NCBI ID | WP_011002444.1 | Uniprot ID | Q8XWE6 |
| Organism | Ralstonia pseudosolanacearum strain RUN6499 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2831955..2842575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPM3_RS13460 (ACEPM3_13460) | sodB | 2833191..2833769 (-) | 579 | WP_011002442.1 | superoxide dismutase [Fe] | - |
| ACEPM3_RS13465 (ACEPM3_13465) | xseA | 2833915..2835330 (-) | 1416 | WP_019718337.1 | exodeoxyribonuclease VII large subunit | - |
| ACEPM3_RS13470 (ACEPM3_13470) | exbB | 2836955..2837575 (+) | 621 | WP_011002444.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| ACEPM3_RS13475 (ACEPM3_13475) | - | 2837598..2838029 (+) | 432 | WP_011002445.1 | biopolymer transporter ExbD | - |
| ACEPM3_RS13480 (ACEPM3_13480) | lpxK | 2838045..2839094 (+) | 1050 | WP_011002446.1 | tetraacyldisaccharide 4'-kinase | - |
| ACEPM3_RS13485 (ACEPM3_13485) | - | 2839154..2839342 (+) | 189 | WP_003266270.1 | Trm112 family protein | - |
| ACEPM3_RS13490 (ACEPM3_13490) | kdsB | 2839361..2840167 (+) | 807 | WP_011002447.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACEPM3_RS13495 (ACEPM3_13495) | adk | 2840487..2841155 (+) | 669 | WP_011002448.1 | adenylate kinase | - |
| ACEPM3_RS13500 (ACEPM3_13500) | - | 2841317..2842075 (+) | 759 | WP_011002449.1 | 3-hydroxyacyl-CoA dehydrogenase | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 22288.15 Da Isoelectric Point: 9.3208
>NTDB_id=936601 ACEPM3_RS13470 WP_011002444.1 2836955..2837575(+) (exbB) [Ralstonia pseudosolanacearum strain RUN6499]
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
Nucleotide
Download Length: 621 bp
>NTDB_id=936601 ACEPM3_RS13470 WP_011002444.1 2836955..2837575(+) (exbB) [Ralstonia pseudosolanacearum strain RUN6499]
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCAGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGCCAGAACGTCGCTCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCAGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGCCAGAACGTCGCTCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
40.488 |
99.515 |
0.403 |