Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5G13_RS02680 | Genome accession | NZ_CP145041 |
| Coordinates | 520588..521520 (+) | Length | 310 a.a. |
| NCBI ID | WP_003692822.1 | Uniprot ID | A0AB74EP13 |
| Organism | Neisseria gonorrhoeae strain WHO_M_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 515588..526520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5G13_RS02655 (V5G13_02660) | - | 516083..516592 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5G13_RS02660 (V5G13_02665) | - | 516822..517403 (-) | 582 | WP_003698180.1 | superoxide dismutase | - |
| V5G13_RS02665 (V5G13_02670) | dnaB | 517566..518972 (+) | 1407 | WP_010359914.1 | replicative DNA helicase | - |
| V5G13_RS02670 (V5G13_02675) | pilH | 519280..519942 (+) | 663 | WP_106176301.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5G13_RS02675 (V5G13_02680) | pilI | 519974..520591 (+) | 618 | WP_106176300.1 | type IV pilus modification protein PilV | Machinery gene |
| V5G13_RS02680 (V5G13_02685) | pilJ | 520588..521520 (+) | 933 | WP_003692822.1 | PilW family protein | Machinery gene |
| V5G13_RS02685 (V5G13_02690) | pilK | 521499..522110 (+) | 612 | WP_106176299.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5G13_RS02690 (V5G13_02695) | pilL | 522112..522585 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| V5G13_RS02695 (V5G13_02700) | - | 522655..522963 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| V5G13_RS02700 (V5G13_02705) | - | 522960..523671 (-) | 712 | Protein_522 | AzlC family ABC transporter permease | - |
| V5G13_RS02705 (V5G13_02710) | dut | 523837..524289 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| V5G13_RS02710 (V5G13_02715) | dapC | 524361..525548 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| V5G13_RS02715 (V5G13_02720) | yaaA | 525704..526483 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 310 a.a. Molecular weight: 34030.92 Da Isoelectric Point: 9.3525
>NTDB_id=936304 V5G13_RS02680 WP_003692822.1 520588..521520(+) (pilJ) [Neisseria gonorrhoeae strain WHO_M_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHIKDVVVSDVAQKNYLFLLKKSNANKLIPIAESSNINYRGFLQVGSALIFQYGIDDVNASAATTVVSSCAAISK
PGKQIPTLEDAKKELKIPDRDKEQNGNIARQRHVVNAYAVGRIDGEGGLFRFQLNEKGEWGNPQLLAKKIKRMRVRYIYV
SGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 933 bp
>NTDB_id=936304 V5G13_RS02680 WP_003692822.1 520588..521520(+) (pilJ) [Neisseria gonorrhoeae strain WHO_M_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGCTTCAATATGTCTGAGCATATCAAAGATGTTGTTGTTTCCGATGTGGCGCAAAAAAACTATCTTTTTTTGTTAAAAAA
GAGCAATGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCAATTATCGGGGTTTTCTCCAGGTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGGATCGGGATAAGGAGCAAAATGGCAA
TATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGACGGTGAGGGAGGTTTGTTCCGCTTCCAAT
TGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTATATCTATGTT
TCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTCTGTTACGCC
TGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTTATGCTTACC
GTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
89.457 |
100 |
0.903 |