Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ACEPOS_RS11620 Genome accession   NZ_CP168497
Coordinates   2319733..2320722 (+) Length   329 a.a.
NCBI ID   WP_020977339.1    Uniprot ID   -
Organism   Staphylococcus aureus strain J23     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2314733..2325722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPOS_RS11595 (ACEPOS_11595) - 2315482..2315973 (+) 492 WP_000383814.1 DUF948 domain-containing protein -
  ACEPOS_RS11600 (ACEPOS_11600) - 2316047..2317405 (+) 1359 WP_373441729.1 hypothetical protein -
  ACEPOS_RS11605 (ACEPOS_11605) - 2317561..2317644 (+) 84 WP_031789490.1 hypothetical protein -
  ACEPOS_RS11610 (ACEPOS_11610) - 2318101..2319192 (+) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  ACEPOS_RS11615 (ACEPOS_11615) - 2319547..2319660 (+) 114 WP_042908725.1 hypothetical protein -
  ACEPOS_RS11620 (ACEPOS_11620) ccpA 2319733..2320722 (+) 990 WP_020977339.1 catabolite control protein A Regulator
  ACEPOS_RS11625 (ACEPOS_11625) - 2320820..2321989 (-) 1170 WP_373441730.1 acetoin utilization protein AcuC -
  ACEPOS_RS11630 (ACEPOS_11630) - 2322014..2322646 (-) 633 WP_020977337.1 hypothetical protein -
  ACEPOS_RS11635 (ACEPOS_11635) acsA 2322815..2324521 (+) 1707 WP_271019719.1 acetate--CoA ligase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36003.18 Da        Isoelectric Point: 5.5023

>NTDB_id=936115 ACEPOS_RS11620 WP_020977339.1 2319733..2320722(+) (ccpA) [Staphylococcus aureus strain J23]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTDGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLAGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=936115 ACEPOS_RS11620 WP_020977339.1 2319733..2320722(+) (ccpA) [Staphylococcus aureus strain J23]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCGCAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAAGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAGATGGTAAGGATGCACATATAGCATCTGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGCAGGTTTAACTGAAGTGTTAAATAAAAATGGTCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGTAATCTTCCAGATGCTATA
TTATGTATCAGTGACGAAGAAGCTATTGGTATCATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGCTTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCGAATGTAGTTTTACCACAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)

Bacterial regulatory proteins, lacI family (LacI)

(4-49)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.879

100

0.48
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Streptococcus pneumoniae D39

46.201

100

0.462