Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5G02_RS02685 | Genome accession | NZ_CP145026 |
| Coordinates | 522359..523303 (+) | Length | 314 a.a. |
| NCBI ID | WP_263328823.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO_S2_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 517359..528303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5G02_RS02660 (V5G02_02660) | - | 517863..518372 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5G02_RS02665 (V5G02_02665) | - | 518604..519185 (-) | 582 | WP_047923823.1 | superoxide dismutase | - |
| V5G02_RS02670 (V5G02_02670) | dnaB | 519349..520755 (+) | 1407 | WP_047923824.1 | replicative DNA helicase | - |
| V5G02_RS02675 (V5G02_02675) | pilH | 521063..521725 (+) | 663 | WP_263328822.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5G02_RS02680 (V5G02_02680) | pilI | 521757..522362 (+) | 606 | WP_353074677.1 | type IV pilus modification protein PilV | Machinery gene |
| V5G02_RS02685 (V5G02_02685) | pilJ | 522359..523303 (+) | 945 | WP_263328823.1 | PilW family protein | Machinery gene |
| V5G02_RS02690 (V5G02_02690) | pilK | 523282..523890 (+) | 609 | WP_047920987.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5G02_RS02695 (V5G02_02695) | pilL | 523892..524365 (+) | 474 | WP_170959666.1 | PilX family type IV pilin | Machinery gene |
| V5G02_RS02700 (V5G02_02700) | - | 524435..524743 (-) | 309 | WP_263328824.1 | AzlD family protein | - |
| V5G02_RS02705 (V5G02_02705) | - | 524740..525451 (-) | 712 | Protein_523 | AzlC family ABC transporter permease | - |
| V5G02_RS02710 (V5G02_02710) | dut | 525617..526069 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| V5G02_RS02715 (V5G02_02715) | dapC | 526141..527328 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| V5G02_RS02720 (V5G02_02720) | yaaA | 527484..528263 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 34356.19 Da Isoelectric Point: 9.5287
>NTDB_id=936066 V5G02_RS02685 WP_263328823.1 522359..523303(+) (pilJ) [Neisseria gonorrhoeae strain WHO_S2_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNSPFSLKRNSTRNSANKLIPIAESSNIVYQGFAQVRPALIFQYGIDDVNASAETTVVSSCG
AISKPGKQIPTLEDAKKELKIQNSGKEQNGNIARQRHVVNAYAVGRIAGEEGLFRFQLDDKGKWGNPQLLAKKIKRMKVL
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNSPFSLKRNSTRNSANKLIPIAESSNIVYQGFAQVRPALIFQYGIDDVNASAETTVVSSCG
AISKPGKQIPTLEDAKKELKIQNSGKEQNGNIARQRHVVNAYAVGRIAGEEGLFRFQLDDKGKWGNPQLLAKKIKRMKVL
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 945 bp
>NTDB_id=936066 V5G02_RS02685 WP_263328823.1 522359..523303(+) (pilJ) [Neisseria gonorrhoeae strain WHO_S2_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACTCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGTATATCAGGGTTTTGCCCAGG
TTCGTCCGGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGAGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGGTAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAAAGTGCTG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAGCAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCCTTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACTCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTGCAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGTATATCAGGGTTTTGCCCAGG
TTCGTCCGGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGAGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCAGAATTCTGGTAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAAAGTGCTG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAGCAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCCTTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
90.764 |
100 |
0.908 |