Detailed information NTG0935467

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACD268_RS09715
• Genome accession: NZ_CP168299
• Coordinates: 1899816..1900715 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC1
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1894816..1905715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD268_RS09690 (ACD268_09690)	rsmA	1895146..1896018 (-)	873	WP_001216876.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
ACD268_RS09695 (ACD268_09695)	-	1896149..1896457 (-)	309	WP_069288309.1	hypothetical protein	-
ACD268_RS09700 (ACD268_09700)	-	1896450..1897091 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ACD268_RS09705 (ACD268_09705)	-	1897093..1899123 (-)	2031	WP_069288308.1	bacteriocin-associated integral membrane family protein	-
ACD268_RS09710 (ACD268_09710)	-	1899200..1899496 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
ACD268_RS09715 (ACD268_09715)	comR	1899816..1900715 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
ACD268_RS09720 (ACD268_09720)	rnmV	1900787..1901347 (-)	561	WP_000664448.1	ribonuclease M5	-
ACD268_RS09725 (ACD268_09725)	-	1901347..1902120 (-)	774	WP_000575638.1	TatD family hydrolase	-
ACD268_RS09730 (ACD268_09730)	-	1902425..1903402 (-)	978	Protein_1905	DUF1542 domain-containing protein	-
ACD268_RS09735 (ACD268_09735)	rpmH	1903608..1903742 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
ACD268_RS09740 (ACD268_09740)	-	1903910..1904863 (-)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=935467 ACD268_RS09715 WP_000904833.1 1899816..1900715(-) (comR) [Streptococcus pneumoniae strain FC1]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=935467 ACD268_RS09715 WP_000904833.1 1899816..1900715(-) (comR) [Streptococcus pneumoniae strain FC1]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361