Detailed information NTG0935267

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACD269_RS09490
• Genome accession: NZ_CP168260
• Coordinates: 1842540..1843439 (-)
• Length: 299 a.a.
• NCBI ID: WP_373380538.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FC2
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1837540..1848439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACD269_RS09465 (ACD269_09465)	rsmA	1837765..1838637 (-)	873	WP_001216863.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
ACD269_RS09470 (ACD269_09470)	-	1838888..1839181 (-)	294	WP_000333250.1	hypothetical protein	-
ACD269_RS09475 (ACD269_09475)	-	1839174..1839815 (-)	642	WP_000565524.1	ABC transporter ATP-binding protein	-
ACD269_RS09480 (ACD269_09480)	-	1839817..1841847 (-)	2031	WP_000825261.1	bacteriocin-associated integral membrane family protein	-
ACD269_RS09485 (ACD269_09485)	-	1841924..1842220 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
ACD269_RS09490 (ACD269_09490)	comR	1842540..1843439 (-)	900	WP_373380538.1	XRE family transcriptional regulator	Regulator
ACD269_RS09495 (ACD269_09495)	rnmV	1843511..1844071 (-)	561	WP_000660013.1	ribonuclease M5	-
ACD269_RS09500 (ACD269_09500)	-	1844071..1844844 (-)	774	WP_000575634.1	TatD family hydrolase	-
ACD269_RS09505 (ACD269_09505)	-	1845150..1845869 (-)	720	Protein_1860	DUF1542 domain-containing protein	-
ACD269_RS09510 (ACD269_09510)	rpmH	1846078..1846212 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
ACD269_RS09515 (ACD269_09515)	-	1846357..1847571 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ACD269_RS09520 (ACD269_09520)	-	1847727..1848020 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35261.17 Da
• Isoelectric Point: 5.0777

>NTDB_id=935267 ACD269_RS09490 WP_373380538.1 1842540..1843439(-) (comR) [Streptococcus pneumoniae strain FC2]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLLKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILGEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=935267 ACD269_RS09490 WP_373380538.1 1842540..1843439(-) (comR) [Streptococcus pneumoniae strain FC2]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCTCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGGGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361