Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V5G22_RS12575 Genome accession   NZ_CP144920
Coordinates   2493500..2495800 (+) Length   766 a.a.
NCBI ID   WP_029327038.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CP26     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2488500..2500800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5G22_RS12550 (V5G22_12550) - 2490015..2491235 (+) 1221 WP_003184864.1 HDOD domain-containing protein -
  V5G22_RS12555 (V5G22_12555) - 2491278..2491616 (-) 339 WP_003184862.1 hypothetical protein -
  V5G22_RS12560 (V5G22_12560) degQ 2492111..2492251 (+) 141 WP_016886113.1 degradation enzyme regulation protein DegQ Regulator
  V5G22_RS12565 (V5G22_12565) - 2492440..2493321 (+) 882 WP_009329511.1 polyprenyl synthetase family protein -
  V5G22_RS12570 (V5G22_12570) comX 2493325..2493498 (+) 174 WP_009329510.1 competence pheromone ComX -
  V5G22_RS12575 (V5G22_12575) comP 2493500..2495800 (+) 2301 WP_029327038.1 ATP-binding protein Regulator
  V5G22_RS12580 (V5G22_12580) comA 2495887..2496525 (+) 639 WP_016886111.1 response regulator transcription factor Regulator
  V5G22_RS12585 (V5G22_12585) - 2496542..2496931 (+) 390 WP_003184847.1 hotdog fold thioesterase -
  V5G22_RS12590 (V5G22_12590) mnhG 2496971..2497345 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  V5G22_RS12595 (V5G22_12595) - 2497329..2497613 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  V5G22_RS12600 (V5G22_12600) - 2497613..2498089 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  V5G22_RS12605 (V5G22_12605) - 2498095..2499573 (-) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  V5G22_RS12610 (V5G22_12610) - 2499566..2499907 (-) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  V5G22_RS12615 (V5G22_12615) - 2499907..2500338 (-) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 87915.24 Da        Isoelectric Point: 7.5826

>NTDB_id=935206 V5G22_RS12575 WP_029327038.1 2493500..2495800(+) (comP) [Bacillus licheniformis strain CP26]
MKFSLKIISVILVCLSFIYSCYVVYICYNNLFVGAYLKYNSDNQLVVDYIQEDSLADYTGLKAGDIILEVNNKKPSKDQP
KNSILANVSSLSIERNGQIITTDTRDTIISYDILFTVLIPIVFYLLCLLCVILILKSKKKQTSSFLLILFLLTVSIAYVS
AGGVSRGNVFSRYVNLLTFISIPISYLHFIYQYFKEIGRKLCSNKVFFFYLLPVLNLVLEIFSGTFEKLNGPIPYINLYS
FFMGLVLVISVFVYGMVKHKNTEQTYFLKMLMLGNFFAVFPFIAFYVIPVLVIDDFIYSAAVVAPFLLIIPFTLVYLFIS
NKMYDVEFLIGRLKYYGLLAIIPTIIMVSTVKLMKFQEGDYYDARLAIYVYLIILGFFYLKEILDYRFRLKRFSEKYNYQ
DSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEEDAKEYPWIPYEQEVTKVITDIGKIVEVD
RGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNKLMFAI
EEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQLLYDLGLV
KALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHYEDDGIGV
DPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=935206 V5G22_RS12575 WP_029327038.1 2493500..2495800(+) (comP) [Bacillus licheniformis strain CP26]
ATGAAATTTTCCTTGAAAATTATTTCAGTTATACTTGTCTGTCTTAGTTTTATCTATAGCTGTTACGTAGTTTATATATG
TTATAACAATTTATTTGTAGGTGCATATTTAAAATACAATTCAGACAATCAACTTGTGGTCGATTATATACAAGAAGATT
CACTGGCGGATTACACAGGCTTAAAAGCTGGGGATATTATTCTTGAAGTGAACAATAAAAAGCCGTCTAAAGACCAGCCG
AAGAATAGTATACTAGCTAATGTTAGTTCCCTTTCTATTGAGAGGAACGGACAAATCATCACTACTGATACAAGAGACAC
CATCATTAGCTATGATATCTTATTTACTGTTTTAATCCCGATAGTGTTTTATTTGTTATGCTTGCTTTGTGTTATTTTAA
TTTTAAAATCTAAAAAGAAACAAACATCTTCATTTTTACTAATTCTATTTTTGCTTACTGTATCGATTGCTTATGTAAGT
GCAGGAGGAGTTTCAAGAGGTAATGTGTTTAGTAGGTATGTAAATTTATTAACCTTTATATCAATTCCAATCAGTTACTT
GCATTTTATATATCAATATTTTAAAGAGATAGGCAGAAAACTATGTAGTAATAAGGTGTTTTTCTTTTATTTACTGCCGG
TTTTAAATCTAGTTCTTGAGATTTTTAGTGGTACTTTTGAAAAACTTAATGGACCTATTCCTTATATTAATTTGTATTCA
TTTTTCATGGGATTAGTATTAGTGATATCTGTGTTTGTTTACGGTATGGTTAAACATAAAAATACAGAGCAAACATATTT
TTTAAAAATGCTGATGCTTGGCAACTTTTTTGCGGTTTTTCCTTTTATTGCATTTTATGTTATCCCGGTCTTAGTCATTG
ATGATTTTATCTATTCTGCAGCAGTAGTTGCTCCGTTTCTATTAATTATTCCTTTTACATTAGTTTATCTATTTATATCA
AACAAAATGTATGACGTGGAATTTTTGATAGGAAGGTTAAAATATTATGGACTGCTTGCAATCATTCCAACCATCATCAT
GGTTTCTACTGTAAAGCTGATGAAATTTCAAGAAGGAGACTATTATGATGCAAGATTAGCAATTTATGTCTATCTTATAA
TTCTAGGGTTTTTCTATCTTAAAGAAATTCTTGACTATCGCTTCCGTCTGAAACGTTTTTCAGAGAAGTATAACTACCAA
GACAGTATATTTAAGTTCACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATTGAAACAAACAAT
TCTTGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTCAAAAGCGACGGAACAATATCTTTGCTCGAAGAAGATG
CCAAAGAATATCCGTGGATCCCCTACGAACAAGAAGTAACCAAGGTGATCACCGACATCGGCAAAATCGTCGAAGTCGAC
CGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTTGTCGGTTTTAAATACGCCTAG
GCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCCTGGAAAACGTGCTGAAAATCG
GCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTGATGTTTGCGATT
GAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATATGATTTCCTTGAAGCATCAAAG
CGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAAGGCTCATCAATATGAATGAGC
AAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTGTTGTACGATCTCGGACTTGTC
AAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATACGGAAAGGTTCTC
AAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGGTTAAACATTCGA
GAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGACGGCATTGGGGTT
GACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCGCGTCCGCGCACTGAACGGCAG
TCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

50.907

100

0.513