Detailed information NTG0093398

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: R8607_RS03265
• Genome accession: NZ_AP028360
• Coordinates: 618810..620783 (-)
• Length: 657 a.a.
• NCBI ID: WP_002869815.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10579
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 613810..625783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8607_RS03235	kdpB	614397..616273 (+)	1877	Protein_624	potassium-transporting ATPase subunit KdpB	-
R8607_RS03240 (B10579_06430)	kdpC	616275..616883 (+)	609	WP_052776648.1	potassium-transporting ATPase subunit KdpC	-
R8607_RS03245 (B10579_06450)	-	617015..617918 (+)	904	Protein_626	sensor histidine kinase KdpD	-
R8607_RS03250	-	618058..618246 (+)	189	WP_230099897.1	DUF4118 domain-containing protein	-
R8607_RS03255	-	618275..618406 (+)	132	WP_230099906.1	hypothetical protein	-
R8607_RS03260 (B10579_06460)	-	618382..618708 (+)	327	WP_224328091.1	hypothetical protein	-
R8607_RS03265 (B10579_06470)	uvrB	618810..620783 (-)	1974	WP_002869815.1	excinuclease ABC subunit UvrB	Machinery gene
R8607_RS03270 (B10579_06480)	-	620937..621167 (+)	231	WP_002852327.1	hypothetical protein	-
R8607_RS03275 (B10579_06490)	-	621157..621399 (+)	243	WP_002854947.1	hypothetical protein	-
R8607_RS03280 (B10579_06500)	Cj0683	621396..621833 (+)	438	WP_002852324.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
R8607_RS03285 (B10579_06510)	priA	621815..623668 (+)	1854	WP_317654550.1	primosomal protein N'	-
R8607_RS03290	cipA	623678..625073 (-)	1396	Protein_635	DUF2972 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 75979.62 Da
• Isoelectric Point: 6.8371

>NTDB_id=93398 R8607_RS03265 WP_002869815.1 618810..620783(-) (uvrB) [Campylobacter jejuni strain BCH-10579]
MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNILENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDIPY
TLFDYFAIKDRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQMAYNKKYNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKLVKELRKQMLEAAKALE
FEKAAAIRDEINKLRDL

Nucleotide

• Length: 1974 bp

>NTDB_id=93398 R8607_RS03265 WP_002869815.1 618810..620783(-) (uvrB) [Campylobacter jejuni strain BCH-10579]
ATGTTAGAACTTACCAGCGAATTTAAACCTAGTCCTGATCAACAAGAAGCCATAAAAGGTATAGTAAAAAGTATAAAAAA
AGGCAACAAATATCAAACCTTACTAGGCGTTACAGGAAGTGGAAAAACCTTTACCATGGCAAATGTCATTAAAGAACTTA
ATATGCCCACTCTTATCATGAGTCACAACAAAAGCCTTTGTGCACAACTTTATAGCGAATTTAAAGGCTTTTTTTCTAAA
AATCATGTGGAATATTTTATATCTTATTATGATTATTATCAACCTGAAGCCTATATTCCACGCACTGATGTTTTCATAGA
AAAAGACAGCTCCACTAATGAAGACTTAGAGCGTTTAAGACTGAGTGCTACTGCTTCTCTTTTAAGTTATGAAGATGTAG
TTTGCATAGCTAGTGTTTCGGCAAATTATGGACTTGGTAATCCAAATGAATACATAGGCATGGTTTTAATCTTTGAACTA
GGTATGCAAATTTCACAAAAAGAACTTTTAAAAAAACTTGTAGATATGGGTTATAAAAGAAATGATAATTTTTTTGATCG
TGCAGATTTTAGAGTTCAAGGAGATATTATAGACATTTATCCAGCTTATTATGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGCGATGAGCTTGATGCTATGTATCATTACAATATTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTC
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGGCTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATATTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAGATAGAAAATTTCTTGTTATAGTCGATGAAAGCCATGTATCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGCAGAAAACAAACCTTGGTGGATTATGGTTTTCGTTTGCCTTCAGCCTTGGATA
ACCGTCCTTTAATGTTTGATGAATTTATCCATAAAAATTGTCAATTTCTTTTTGTTTCAGCCACACCTGCACCTTTAGAA
CTTGAACTGAGTAAAGAAAACATCTTTCATCAAATCATGCGTCCTACGGGACTGCTTGATCCTTTAATAGAGTTAAAAGA
TAGTGATAATCAGGTTGAAATTTTATTTGATGAGGCTAAAAAAGTCATACAAAGGAATGAACGTGTTTTAGTGACTGTGC
TAACTAAAAAACTCGCTGAAGAACTTACAAGGTATTATTTAGAGCTTGGTATAAAAGTCAAATACATGCACTCAGACATC
GATGCTATAGAACGTAATGAAATCATAAGAGGTTTAAGAAGCGGTGCTTTTGATATGCTAATTGGCATTAACTTACTTAG
AGAAGGACTAGATCTACCTGAAGTTTCACTCATTGCCATTATGGATGCAGATAAGGAAGGATTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCAGCTAGAAATGTCAATGGTAAGGTTTTGCTTTTTTGCAAAAAAATCACAAAATCC
ATGCAAGAAGCTATGGATACCACAAATGAACGCCGCAAACTTCAAATGGCTTATAATAAAAAATACAATATCACGCCAAC
TTCAGTTAAACGCCATATTGAAGAGAGTTTAAAAAATGAAGAGGATTTAGGCGAAATTTATCGCAAAGGTAAAAAACTAG
AAAAAATGCCTGCTAGCGAAAGAGCTAAACTTGTCAAAGAGTTAAGAAAACAAATGCTTGAAGCAGCTAAAGCACTTGAG
TTTGAAAAAGCTGCTGCTATTAGAGATGAGATTAATAAATTAAGGGATTTATAA

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (623-656)

• Ultra-violet resistance protein B (UvrB) (552-593)

• UvrB interaction domain (UvrB_inter) (158-246)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.926	98.63	0.502
uvrB	Streptococcus pneumoniae D39	50.926	98.63	0.502
uvrB	Streptococcus pneumoniae TIGR4	50.926	98.63	0.502