Detailed information NTG0931501

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: U6C02_RS07890
• Genome accession: NZ_CP143843
• Coordinates: 1522218..1523381 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain YM-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1517218..1528381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6C02_RS07870 (U6C02_07870)	tuaH	1517634..1518830 (+)	1197	WP_044052856.1	teichuronic acid biosynthesis protein TuaH	-
U6C02_RS07875 (U6C02_07875)	-	1518963..1520039 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
U6C02_RS07880 (U6C02_07880)	-	1520129..1521343 (-)	1215	WP_003151383.1	LCP family protein	-
U6C02_RS07885 (U6C02_07885)	-	1521348..1521995 (-)	648	WP_003151384.1	YigZ family protein	-
U6C02_RS07890 (U6C02_07890)	degS	1522218..1523381 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
U6C02_RS07895 (U6C02_07895)	degU	1523458..1524136 (+)	679	Protein_1491	two-component system response regulator DegU	-
U6C02_RS07900 (U6C02_07900)	-	1524234..1525082 (+)	849	WP_003151387.1	DegV family protein	-
U6C02_RS07905 (U6C02_07905)	comFA	1525190..1526575 (+)	1386	WP_025853539.1	DEAD/DEAH box helicase	Machinery gene
U6C02_RS07910 (U6C02_07910)	-	1526633..1526917 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
U6C02_RS07915 (U6C02_07915)	comFC	1526923..1527612 (+)	690	WP_197738786.1	phosphoribosyltransferase family protein	Machinery gene
U6C02_RS07920 (U6C02_07920)	-	1527686..1528105 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=931501 U6C02_RS07890 WP_003151385.1 1522218..1523381(+) (degS) [Bacillus velezensis strain YM-3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=931501 U6C02_RS07890 WP_003151385.1 1522218..1523381(+) (degS) [Bacillus velezensis strain YM-3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948