Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   V1574_RS10740 Genome accession   NZ_CP143711
Coordinates   2277822..2278448 (+) Length   208 a.a.
NCBI ID   WP_395299112.1    Uniprot ID   -
Organism   Enterobacter kobei strain ECC-142     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2272822..2283448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1574_RS10720 (V1574_10715) - 2273220..2274980 (-) 1761 WP_014883250.1 Lon protease family protein -
  V1574_RS10725 (V1574_10720) matP 2275167..2275619 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  V1574_RS10730 (V1574_10725) ompA 2275684..2276739 (-) 1056 WP_014883252.1 porin OmpA -
  V1574_RS10735 (V1574_10730) sulA 2277095..2277604 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  V1574_RS10740 (V1574_10735) sxy/tfoX 2277822..2278448 (+) 627 WP_395299112.1 TfoX/Sxy family DNA transformation protein Regulator
  V1574_RS10745 (V1574_10740) yccS 2278405..2280567 (-) 2163 WP_014883255.1 YccS family putative transporter -
  V1574_RS10750 (V1574_10745) - 2280587..2281033 (-) 447 WP_014883256.1 YccF domain-containing protein -
  V1574_RS10755 (V1574_10750) helD 2281157..2283211 (+) 2055 WP_014883257.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23962.57 Da        Isoelectric Point: 9.0691

>NTDB_id=930822 V1574_RS10740 WP_395299112.1 2277822..2278448(+) (sxy/tfoX) [Enterobacter kobei strain ECC-142]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAFEGLHEAALPAGIRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=930822 V1574_RS10740 WP_395299112.1 2277822..2278448(+) (sxy/tfoX) [Enterobacter kobei strain ECC-142]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCCCT
GTTCGGTGGCTATACCCTGGCGGTAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCGTGTG
AAGAAAGCGCAAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACTTTTCAGCTTGAGGTATTACTTT
TCGAAGCGGGCATTACTAACGAAGAGACGCTGCGGGCGCTGGGTGCCAGGGAGTGCTGGTTGAAAATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTTGCCCTTGAGGGGGCTTTTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558