Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MWM16_RS10080 | Genome accession | NZ_AP025617 |
| Coordinates | 1841904..1842212 (+) | Length | 102 a.a. |
| NCBI ID | WP_024119555.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM7-6 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1836904..1847212
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM16_RS10050 (TthSNM76_19680) | - | 1837986..1838450 (+) | 465 | WP_011229049.1 | hypothetical protein | - |
| MWM16_RS10055 (TthSNM76_19690) | pfkA | 1838427..1839395 (-) | 969 | WP_011173968.1 | 6-phosphofructokinase | - |
| MWM16_RS10060 (TthSNM76_19700) | rsmI | 1839392..1840186 (-) | 795 | WP_244341015.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MWM16_RS10065 (TthSNM76_19710) | - | 1840188..1840682 (-) | 495 | WP_244344593.1 | TFIIB-type zinc ribbon-containing protein | - |
| MWM16_RS10070 (TthSNM76_19720) | - | 1840745..1841272 (-) | 528 | WP_011173971.1 | inorganic diphosphatase | - |
| MWM16_RS10075 (TthSNM76_19730) | - | 1841305..1841931 (+) | 627 | WP_011173972.1 | YcxB family protein | - |
| MWM16_RS10080 (TthSNM76_19740) | comEA | 1841904..1842212 (+) | 309 | WP_024119555.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| MWM16_RS10085 (TthSNM76_19750) | comA/comEC | 1842209..1844242 (+) | 2034 | WP_244341018.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| MWM16_RS10090 (TthSNM76_19760) | - | 1844230..1845039 (-) | 810 | WP_024119553.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM16_RS10095 (TthSNM76_19770) | soj | 1845023..1845772 (-) | 750 | WP_011173976.1 | chromosome-partitioning ATPase Soj | - |
| MWM16_RS10100 (TthSNM76_19780) | rsmG | 1845766..1846515 (-) | 750 | WP_203971383.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 10947.23 Da Isoelectric Point: 10.3435
>NTDB_id=93073 MWM16_RS10080 WP_024119555.1 1841904..1842212(+) (comEA) [Thermus thermophilus strain SNM7-6]
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
MVLGYLLAVALLGLLALWPKLAPAPLPVRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYARVE
DLLKVKGIGPATLERLRPYLRP
Nucleotide
Download Length: 309 bp
>NTDB_id=93073 MWM16_RS10080 WP_024119555.1 1841904..1842212(+) (comEA) [Thermus thermophilus strain SNM7-6]
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
CTGGTCCTCGGCTACCTCCTCGCGGTAGCCCTCCTCGGCCTCCTCGCCCTCTGGCCCAAGCTCGCCCCCGCCCCGCTTCC
GGTGCGGGTGGAGGCCCTGGGAAAGGTCGCCCCTTTGCCCCAGGCGCAAACCCCCGTGAGCCTGAACGAGGCGAGCCTGG
AAGAGCTCATGGCCCTGCCCGGCATCGGCCCCGTCCTGGCCCGGCGCATCGTGGAGGGCAGGCCCTACGCCCGGGTGGAG
GACCTCCTCAAGGTGAAAGGGATCGGCCCCGCCACCCTGGAGCGCCTCCGCCCCTACCTCCGGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
100 |
100 |
1 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.815 |
100 |
0.422 |