Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | MWM12_RS07305 | Genome accession | NZ_AP025603 |
| Coordinates | 1342174..1342755 (+) | Length | 193 a.a. |
| NCBI ID | WP_011173434.1 | Uniprot ID | Q72IW6 |
| Organism | Thermus thermophilus strain SNM1-7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1337174..1347755
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM12_RS07280 (TthSNM17_14250) | - | 1338345..1338695 (+) | 351 | Protein_1411 | HD domain-containing phosphohydrolase | - |
| MWM12_RS07285 (TthSNM17_14260) | - | 1338746..1339237 (+) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| MWM12_RS07290 (TthSNM17_14270) | - | 1339292..1340296 (+) | 1005 | WP_244340638.1 | homoisocitrate dehydrogenase | - |
| MWM12_RS07295 (TthSNM17_14280) | pilM | 1340435..1341568 (+) | 1134 | WP_244340640.1 | type IV pilus assembly protein PilM | Machinery gene |
| MWM12_RS07300 (TthSNM17_14290) | pilN | 1341561..1342184 (+) | 624 | WP_011173433.1 | competence protein | Machinery gene |
| MWM12_RS07305 (TthSNM17_14300) | pilO | 1342174..1342755 (+) | 582 | WP_011173434.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| MWM12_RS07310 (TthSNM17_14310) | pilW | 1342752..1343630 (+) | 879 | WP_244340642.1 | competence protein | Machinery gene |
| MWM12_RS07315 (TthSNM17_14320) | pilQ | 1343627..1345900 (+) | 2274 | WP_244340644.1 | secretin N-terminal domain-containing protein | Machinery gene |
| MWM12_RS07320 (TthSNM17_14330) | aroC | 1345959..1347110 (+) | 1152 | WP_143586076.1 | chorismate synthase | - |
| MWM12_RS07325 (TthSNM17_14340) | - | 1347135..1347689 (+) | 555 | WP_008632876.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21368.70 Da Isoelectric Point: 8.4290
>NTDB_id=92990 MWM12_RS07305 WP_011173434.1 1342174..1342755(+) (pilO) [Thermus thermophilus strain SNM1-7]
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQARRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATSLTLTVYVLAQGVEAETGGSTP
MLARLGQREWALLAMVLTALLGLLWYYLLIVPTRQEIATVRQEIDRLTIERNRGLQARRALPELRATIAALQAQRLAFLR
ALPREERLAEVLSEVLQDAEASGVVVRSFTRSRTSAPVPEVRAVNLALALEAPFPETYAYLRRLEDLSRFSTLSGLNLSV
QSQEANPTLATSLTLTVYVLAQGVEAETGGSTP
Nucleotide
Download Length: 582 bp
>NTDB_id=92990 MWM12_RS07305 WP_011173434.1 1342174..1342755(+) (pilO) [Thermus thermophilus strain SNM1-7]
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCGCCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAAACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCAGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
GTGCTCGCTAGGCTGGGACAGCGGGAGTGGGCCCTCCTGGCCATGGTCCTCACCGCCCTCCTGGGGCTCCTCTGGTACTA
CCTGCTCATCGTGCCCACGAGGCAGGAGATCGCCACCGTCCGGCAGGAGATTGACCGCCTCACCATAGAGCGCAACCGCG
GGCTCCAGGCCCGCCGGGCCCTTCCCGAGCTCCGCGCCACCATCGCCGCCCTTCAGGCCCAAAGGCTCGCCTTCCTCCGG
GCCCTGCCCCGGGAGGAAAGGCTCGCCGAGGTCCTCTCCGAGGTGCTCCAGGACGCGGAGGCGAGCGGGGTGGTGGTCCG
AAGCTTCACCCGAAGCCGCACCTCGGCCCCGGTGCCCGAGGTGCGGGCCGTGAACCTGGCCCTGGCCCTCGAGGCCCCCT
TCCCCGAAACCTACGCCTACCTGCGGCGCCTGGAGGACCTCTCCCGCTTCAGCACCCTTTCCGGCCTCAACCTGAGCGTC
CAGAGCCAGGAAGCGAACCCCACCCTCGCCACCAGCCTCACCTTGACCGTCTACGTGCTGGCCCAGGGGGTGGAGGCGGA
AACGGGAGGGAGCACCCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Thermus thermophilus HB27 |
100 |
100 |
1 |