Detailed information NTG0092988

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MWM12_RS07295
• Genome accession: NZ_AP025603
• Coordinates: 1340435..1341568 (+)
• Length: 377 a.a.
• NCBI ID: WP_244340640.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain SNM1-7
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1335435..1346568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM12_RS07260 (TthSNM17_14230)	-	1335790..1336155 (-)	366	WP_172619229.1	hypothetical protein	-
MWM12_RS07275 (TthSNM17_14240)	-	1336705..1337805 (-)	1101	WP_244340636.1	transposase	-
MWM12_RS07280 (TthSNM17_14250)	-	1338345..1338695 (+)	351	Protein_1411	HD domain-containing phosphohydrolase	-
MWM12_RS07285 (TthSNM17_14260)	-	1338746..1339237 (+)	492	WP_011173430.1	DUF5317 domain-containing protein	-
MWM12_RS07290 (TthSNM17_14270)	-	1339292..1340296 (+)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
MWM12_RS07295 (TthSNM17_14280)	pilM	1340435..1341568 (+)	1134	WP_244340640.1	type IV pilus assembly protein PilM	Machinery gene
MWM12_RS07300 (TthSNM17_14290)	pilN	1341561..1342184 (+)	624	WP_011173433.1	competence protein	Machinery gene
MWM12_RS07305 (TthSNM17_14300)	pilO	1342174..1342755 (+)	582	WP_011173434.1	type 4a pilus biogenesis protein PilO	Machinery gene
MWM12_RS07310 (TthSNM17_14310)	pilW	1342752..1343630 (+)	879	WP_244340642.1	competence protein	Machinery gene
MWM12_RS07315 (TthSNM17_14320)	pilQ	1343627..1345900 (+)	2274	WP_244340644.1	secretin N-terminal domain-containing protein	Machinery gene

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41413.04 Da
• Isoelectric Point: 4.3805

>NTDB_id=92988 MWM12_RS07295 WP_244340640.1 1340435..1341568(+) (pilM) [Thermus thermophilus strain SNM1-7]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLLELTQELRRSLEFFRIQLEEASPEMGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=92988 MWM12_RS07295 WP_244340640.1 1340435..1341568(+) (pilM) [Thermus thermophilus strain SNM1-7]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGGTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCTGGCCTCCTGATGGAAGGGA
TGGTGGCCGAGCCCGCCGCGCTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGGTCATCCTCCGCCCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAGGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTGATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAGGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGTCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCCTCCCCACCGAGGACGAGGAGCTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTACGACGCCATCCGCCCGGTGCTGTTGGAGCTCACCCAGGAGCTCCGCCGTA
GCCTTGAGTTCTTCCGCATCCAGCTGGAGGAGGCCTCGCCCGAGATGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCCTGGGGGTGAACTTTGAGCCCGTCAACCCCTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTGGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	99.735	100	0.997