Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ACB350_RS01480 Genome accession   NZ_CP166999
Coordinates   278235..278786 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 34     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 273235..283786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB350_RS01480 (ACB350_01480) comX/sigX/comX2/sigX2 278235..278786 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ACB350_RS01485 (ACB350_01485) - 279375..280508 (+) 1134 WP_076636818.1 ISAs1-like element IS1548 family transposase -
  ACB350_RS01490 (ACB350_01490) - 280671..281198 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ACB350_RS01495 (ACB350_01495) yqeH 281198..282316 (+) 1119 WP_011184178.1 ribosome biogenesis GTPase YqeH -
  ACB350_RS01500 (ACB350_01500) yhbY 282341..282649 (+) 309 WP_030127134.1 ribosome assembly RNA-binding protein YhbY -
  ACB350_RS01505 (ACB350_01505) - 282718..283350 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=929468 ACB350_RS01480 WP_010921894.1 278235..278786(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 34]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=929468 ACB350_RS01480 WP_010921894.1 278235..278786(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 34]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAGTTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.