Detailed information NTG0929119

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AB3239_RS14640
• Genome accession: NZ_CP166831
• Coordinates: 2790491..2791096 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain TE3T-UV25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2785491..2796096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3239_RS14610 (AB3239_14610)	-	2786304..2786693 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
AB3239_RS14615 (AB3239_14615)	yajC	2786750..2787016 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AB3239_RS14620 (AB3239_14620)	tgt	2787053..2788198 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AB3239_RS14625 (AB3239_14625)	queA	2788225..2789253 (-)	1029	WP_124072893.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AB3239_RS14630 (AB3239_14630)	yrzS	2789283..2789483 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AB3239_RS14635 (AB3239_14635)	ruvB	2789476..2790480 (-)	1005	WP_302896764.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AB3239_RS14640 (AB3239_14640)	ruvA	2790491..2791096 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AB3239_RS14645 (AB3239_14645)	bofC	2791235..2791747 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
AB3239_RS14650 (AB3239_14650)	csbX	2791795..2793102 (-)	1308	WP_370956906.1	MFS transporter	-
AB3239_RS14655 (AB3239_14655)	iolG	2793173..2794198 (-)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
AB3239_RS14660 (AB3239_14660)	yrzF	2794436..2795083 (+)	648	WP_049141074.1	phosphotransferase	-
AB3239_RS14665 (AB3239_14665)	-	2795129..2795251 (-)	123	WP_003229707.1	hypothetical protein	-
AB3239_RS14670 (AB3239_14670)	-	2795455..2795781 (+)	327	WP_249849671.1	DUF5412 family protein	-
AB3239_RS14675 (AB3239_14675)	-	2795788..2795928 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=929119 AB3239_RS14640 WP_003229717.1 2790491..2791096(-) (ruvA) [Bacillus subtilis strain TE3T-UV25]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=929119 AB3239_RS14640 WP_003229717.1 2790491..2791096(-) (ruvA) [Bacillus subtilis strain TE3T-UV25]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATAATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408