Detailed information NTG0928311

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: U6151_RS00335
• Genome accession: NZ_CP143257
• Coordinates: 77157..78473 (-)
• Length: 438 a.a.
• NCBI ID: WP_043572710.1
• Uniprot ID: A0A2R2IQM7
• Organism: Chromobacterium subtsugae isolate delta-vioS
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 72157..83473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6151_RS00315 (U6151_00315)	-	72700..73701 (+)	1002	WP_043572698.1	glycosyltransferase	-
U6151_RS00320 (U6151_00320)	-	73755..74912 (+)	1158	WP_043572702.1	acyltransferase	-
U6151_RS00325 (U6151_00325)	-	75423..75575 (+)	153	WP_155294732.1	hypothetical protein	-
U6151_RS00330 (U6151_00330)	-	75760..77052 (+)	1293	WP_043572705.1	hypothetical protein	-
U6151_RS00335 (U6151_00335)	pilR	77157..78473 (-)	1317	WP_043572710.1	sigma-54 dependent transcriptional regulator	Regulator
U6151_RS00340 (U6151_00340)	-	78466..80022 (-)	1557	WP_043572712.1	nitrogen regulation protein NR(II)	-
U6151_RS00345 (U6151_00345)	parC	80022..82373 (-)	2352	WP_043572715.1	DNA topoisomerase IV subunit A	-
U6151_RS00350 (U6151_00350)	-	82492..82953 (+)	462	WP_043572718.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 438 a.a.
• Molecular weight: 48063.06 Da
• Isoelectric Point: 5.5916

>NTDB_id=928311 U6151_RS00335 WP_043572710.1 77157..78473(-) (pilR) [Chromobacterium subtsugae isolate delta-vioS]
MTKTPMRVLVVDDEPDIRELLELTLLKMGLLPVCAGSVAEAKGMLGAGPFDLALTDMRLPDGEGLEVVRHIGEQALDVPI
AVITAYGSTDNAVRAMKAGAFDYLQKPVSLAQLRSLVKTALRVEGGKPAQQQRLVGDSSAIQEVLRLIEKLSRSQAAVYI
RGESGTGKEQAARLIHEQGPRAERPFVAVNCGAIPDSLMESEFFGYKKGAFTGADADHDGFFQQALGGTLFLDEVADLPL
AMQVKLLRAIQEKTVRKLGGSQEEAVDARIICATHQDLAARVEAGSFRQDLYYRLNVLPLRMPALRELREDIPLFAQQLL
QRYAGDGAAPQLAADARQALQDYGYPGNFRELENILERAVALAAGPVLSRDDLQLTPPREYCPEPGSAEPLQDYLDRVER
EAIAKALDATHYNRTQAAKRLGVTFRSLRYRMERLGVR

Nucleotide

• Length: 1317 bp

>NTDB_id=928311 U6151_RS00335 WP_043572710.1 77157..78473(-) (pilR) [Chromobacterium subtsugae isolate delta-vioS]
ATGACTAAGACACCGATGCGGGTATTGGTAGTGGACGACGAGCCGGACATCCGCGAGCTGCTGGAGCTGACTCTGCTGAA
AATGGGCTTGCTGCCGGTCTGCGCCGGCAGCGTGGCCGAGGCCAAGGGCATGCTGGGCGCCGGGCCGTTCGACCTGGCGC
TGACCGATATGCGGCTGCCCGACGGCGAAGGGCTGGAAGTGGTGCGCCACATCGGCGAGCAGGCGCTGGACGTGCCGATC
GCGGTGATCACCGCCTACGGCAGCACCGACAACGCGGTGCGGGCGATGAAGGCCGGGGCTTTCGACTATCTGCAAAAGCC
GGTGAGCCTGGCGCAGCTGCGCAGCCTGGTGAAGACCGCGTTGCGGGTGGAGGGCGGCAAGCCGGCGCAGCAGCAGCGGC
TGGTTGGCGACTCGTCGGCCATCCAGGAAGTGCTGCGGCTGATAGAAAAGTTGTCGCGCAGCCAGGCCGCGGTCTATATC
CGCGGCGAATCCGGCACCGGCAAGGAGCAGGCGGCGCGGCTGATCCACGAGCAGGGACCGCGCGCCGAGCGCCCCTTCGT
CGCGGTCAACTGCGGCGCGATCCCCGACAGCCTGATGGAAAGCGAATTCTTCGGCTACAAGAAAGGCGCCTTCACCGGCG
CCGACGCCGACCATGACGGGTTTTTCCAGCAGGCGTTGGGCGGCACGCTGTTTCTGGACGAAGTGGCCGACCTGCCGCTG
GCGATGCAGGTGAAGCTGCTGCGCGCCATTCAGGAGAAAACAGTGCGCAAGCTGGGCGGCAGCCAGGAAGAGGCGGTGGA
CGCGCGCATCATCTGCGCCACCCACCAGGACCTGGCGGCGCGGGTGGAGGCCGGCAGCTTCCGCCAGGACCTGTACTACC
GCCTGAACGTGCTGCCGCTGCGGATGCCGGCGCTGCGCGAGTTGCGCGAGGACATTCCGCTGTTCGCGCAGCAGTTGCTG
CAGCGCTACGCCGGCGACGGCGCGGCGCCGCAGCTGGCGGCGGATGCCCGCCAGGCGCTGCAGGACTACGGCTACCCCGG
CAATTTCCGCGAGCTGGAGAACATTCTGGAGCGGGCGGTGGCGCTGGCCGCCGGCCCGGTGTTGAGCCGGGACGATCTGC
AACTGACGCCGCCGCGCGAATATTGCCCGGAGCCGGGCAGCGCCGAACCGCTGCAGGACTATCTGGACCGGGTGGAGCGC
GAGGCGATCGCCAAGGCGCTGGACGCTACCCATTACAACCGCACCCAGGCCGCCAAACGCCTGGGCGTGACCTTCCGCTC
GCTGCGCTACCGGATGGAGCGGCTGGGGGTGAGGTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (134-300)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (395-434)

3D structure

• AlphaFold DB: A0A2R2IQM7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.091	100	0.594
pilR	Acinetobacter baumannii strain A118	44.76	100	0.468
luxO	Vibrio cholerae strain A1552	37.613	100	0.381