Detailed information NTG0928154

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB8O64_RS12715
• Genome accession: NZ_CP166299
• Coordinates: 2827348..2828634 (-)
• Length: 428 a.a.
• NCBI ID: WP_365370604.1
• Uniprot ID: -
• Organism: Streptomyces sp. QH1-20
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2822348..2833634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O64_RS12700 (AB8O64_12710)	-	2824643..2825569 (+)	927	WP_370419278.1	hypothetical protein	-
AB8O64_RS12705 (AB8O64_12715)	-	2825687..2826670 (+)	984	WP_370419279.1	hypothetical protein	-
AB8O64_RS12710 (AB8O64_12720)	-	2826883..2827278 (+)	396	WP_370419280.1	hypothetical protein	-
AB8O64_RS12715 (AB8O64_12725)	clpX	2827348..2828634 (-)	1287	WP_365370604.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB8O64_RS12720 (AB8O64_12730)	clpP	2828787..2829455 (-)	669	WP_130877735.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB8O64_RS12725 (AB8O64_12735)	clpP	2829512..2830129 (-)	618	WP_370419281.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB8O64_RS12730 (AB8O64_12740)	tig	2830420..2831802 (-)	1383	WP_356456837.1	trigger factor	-
AB8O64_RS12745 (AB8O64_12755)	-	2832591..2832764 (-)	174	WP_362213498.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46976.81 Da
• Isoelectric Point: 4.7886

>NTDB_id=928154 AB8O64_RS12715 WP_365370604.1 2827348..2828634(-) (clpX) [Streptomyces sp. QH1-20]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENAGSRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVITED
VVHSNVNPTLVPREPRIVGKDERHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=928154 AB8O64_RS12715 WP_365370604.1 2827348..2828634(-) (clpX) [Streptomyces sp. QH1-20]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCT
CCGAGGTGCGTTGGGAGGAGCTTCCCAAGCCCCGTGAGATCTACGAGTTCCTCGAAGGCTATGTAGTGGGCCAGGAGGCA
GCCAAGAAGGCTCTCTCCGTCGCGGTCTACAACCACTACAAGCGTGTGCAGGCCGGCGAGAACGCCGGAAGCCGCGACGA
CGGCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCTACGGGCTCCGGCAAGACCCTGCTCGCGCAGACGCTCG
CCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACCGCGCTGACGGAGGCGGGCTATGTGGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGATGAGAT
CGACAAGGTCGCCCGAAAGAGCGAAAATCCGTCGATCACACGAGACGTTTCCGGCGAGGGCGTCCAGCAGGCCCTGCTGA
AGATCCTGGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGCCAAGGG
CATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCCGAATTCATCGGTCGCCTCCCGGTCATCACCTCCGTCCACAACCTGGACCGCGAGGCG
CTCCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGTGGAGCT
GGACTTCGACCGCCCGGCCCTCGAGGCCATCGCCGACCAGGCCATCCTCCGTGGCACGGGTGCGCGAGGCCTGCGCGCCA
TCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACCGAAGAC
GTCGTCCACTCGAACGTCAACCCCACCCTGGTGCCGCGCGAGCCCCGCATCGTGGGCAAGGACGAACGACACGAGAAGAG
CGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-393)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.75	93.458	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.902	95.794	0.516