Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   VJ143_RS17820 Genome accession   NZ_CP142740
Coordinates   3830183..3830566 (-) Length   127 a.a.
NCBI ID   WP_327857719.1    Uniprot ID   -
Organism   Acinetobacter guillouiae strain 13-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3825183..3835566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VJ143_RS17805 (VJ143_17815) - 3827137..3829206 (-) 2070 WP_056515207.1 methyl-accepting chemotaxis protein -
  VJ143_RS17810 (VJ143_17820) - 3829249..3829785 (-) 537 WP_004723799.1 chemotaxis protein CheW -
  VJ143_RS17815 (VJ143_17825) - 3829789..3830157 (-) 369 WP_004723801.1 response regulator -
  VJ143_RS17820 (VJ143_17830) pilG 3830183..3830566 (-) 384 WP_327857719.1 twitching motility response regulator PilG Regulator
  VJ143_RS17825 (VJ143_17835) - 3830851..3831492 (+) 642 WP_327857720.1 hypothetical protein -
  VJ143_RS17830 (VJ143_17840) - 3831742..3833457 (+) 1716 WP_224964232.1 proline--tRNA ligase -
  VJ143_RS17835 (VJ143_17845) - 3833553..3834512 (-) 960 WP_327857721.1 DUF6160 family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14257.33 Da        Isoelectric Point: 4.7172

>NTDB_id=926652 VJ143_RS17820 WP_327857719.1 3830183..3830566(-) (pilG) [Acinetobacter guillouiae strain 13-3]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTT

Nucleotide


Download         Length: 384 bp        

>NTDB_id=926652 VJ143_RS17820 WP_327857719.1 3830183..3830566(-) (pilG) [Acinetobacter guillouiae strain 13-3]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTTGTCACTGCTGTAGACGGTTTTGAAGCCTTATCTAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTCTAGATGGCTACCAAACCTGCGCTTTGATTAAAAACTCCCAAAATTATCAA
AATATTCCAGTCATCATGTTATCTAGTAAAGATGGCTTATTTGATCAAGCAAAAGGTCGTGTTGTCGGTTCGGACGAATA
TTTAACAAAACCATTTAGTAAAGATGAACTATTAAATGCTATTCGCAATCATGTGACTACTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37