Detailed information NTG0925852

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AB5991_RS14120
• Genome accession: NZ_CP163447
• Coordinates: 2609894..2610499 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SD2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2604894..2615499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5991_RS14090 (AB5991_14090)	-	2605707..2606096 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
AB5991_RS14095 (AB5991_14095)	yajC	2606153..2606419 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AB5991_RS14100 (AB5991_14100)	tgt	2606456..2607601 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AB5991_RS14105 (AB5991_14105)	queA	2607628..2608656 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AB5991_RS14110 (AB5991_14110)	yrzS	2608686..2608886 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AB5991_RS14115 (AB5991_14115)	ruvB	2608879..2609883 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AB5991_RS14120 (AB5991_14120)	ruvA	2609894..2610499 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AB5991_RS14125 (AB5991_14125)	bofC	2610638..2611150 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
AB5991_RS14130 (AB5991_14130)	csbX	2611198..2612505 (-)	1308	WP_014480439.1	MFS transporter	-
AB5991_RS14135 (AB5991_14135)	iolG	2612576..2613601 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
AB5991_RS14140 (AB5991_14140)	yrzF	2613839..2614486 (+)	648	WP_014480441.1	phosphotransferase	-
AB5991_RS14145 (AB5991_14145)	-	2614532..2614654 (-)	123	WP_003229707.1	hypothetical protein	-
AB5991_RS14150 (AB5991_14150)	-	2614739..2614813 (+)	75	Protein_2740	hypothetical protein	-
AB5991_RS14155 (AB5991_14155)	-	2614817..2615185 (+)	369	WP_186437837.1	DUF5412 family protein	-
AB5991_RS14160 (AB5991_14160)	-	2615192..2615332 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=925852 AB5991_RS14120 WP_003229717.1 2609894..2610499(-) (ruvA) [Bacillus subtilis strain SD2]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=925852 AB5991_RS14120 WP_003229717.1 2609894..2610499(-) (ruvA) [Bacillus subtilis strain SD2]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408