Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VKP54_RS02430 Genome accession   NZ_CP142356
Coordinates   452190..452999 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain CT95-157     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 447190..457999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP54_RS02410 (VKP54_02410) - 447632..448879 (+) 1248 WP_023612155.1 AMP-binding protein -
  VKP54_RS02415 (VKP54_02415) - 448935..449969 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  VKP54_RS02420 (VKP54_02420) vicR 450131..450841 (+) 711 WP_002985645.1 response regulator YycF Regulator
  VKP54_RS02425 (VKP54_02425) vicK 450834..452186 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VKP54_RS02430 (VKP54_02430) vicX 452190..452999 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  VKP54_RS02435 (VKP54_02435) rnc 453431..454123 (+) 693 WP_002985639.1 ribonuclease III -
  VKP54_RS02440 (VKP54_02440) smc 454124..457663 (+) 3540 WP_111711430.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=925321 VKP54_RS02430 WP_002985641.1 452190..452999(+) (vicX) [Streptococcus pyogenes strain CT95-157]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=925321 VKP54_RS02430 WP_002985641.1 452190..452999(+) (vicX) [Streptococcus pyogenes strain CT95-157]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758