Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   VKP40_RS07000 Genome accession   NZ_CP142355
Coordinates   1393905..1394906 (-) Length   333 a.a.
NCBI ID   WP_002985680.1    Uniprot ID   A0A4U7H1B9
Organism   Streptococcus pyogenes strain A946     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388905..1399906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP40_RS06985 (VKP40_06985) thrS 1389075..1391018 (-) 1944 WP_002985672.1 threonine--tRNA ligase -
  VKP40_RS06990 (VKP40_06990) - 1391440..1392774 (-) 1335 WP_002994187.1 glycosyltransferase family 4 protein -
  VKP40_RS06995 (VKP40_06995) - 1392776..1393774 (-) 999 WP_002985678.1 glycosyltransferase family 4 protein -
  VKP40_RS07000 (VKP40_07000) ccpA 1393905..1394906 (-) 1002 WP_002985680.1 catabolite control protein A Regulator
  VKP40_RS07005 (VKP40_07005) - 1395080..1396165 (+) 1086 WP_085634187.1 aminopeptidase P family protein -
  VKP40_RS07010 (VKP40_07010) - 1396214..1396879 (+) 666 WP_326675607.1 NAD(P)H-dependent oxidoreductase -
  VKP40_RS07015 (VKP40_07015) - 1396890..1397267 (+) 378 WP_002985686.1 VOC family protein -
  VKP40_RS07020 (VKP40_07020) - 1397412..1398338 (+) 927 WP_002990711.1 glycosyltransferase family 2 protein -
  VKP40_RS07025 (VKP40_07025) - 1398549..1399232 (+) 684 WP_002990714.1 DUF969 domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36713.83 Da        Isoelectric Point: 5.9985

>NTDB_id=925285 VKP40_RS07000 WP_002985680.1 1393905..1394906(-) (ccpA) [Streptococcus pyogenes strain A946]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLDHQLPS
VNIDYRAAVSNVVDILAENHKCIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=925285 VKP40_RS07000 WP_002985680.1 1393905..1394906(-) (ccpA) [Streptococcus pyogenes strain A946]
ATGAATACAGATGATACCATTACAATTTATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAATAAAAATGTTAAGGAAAATACACGTAAGAAAGTTTTAGAAGTTATTGATCGCCTTGACTATCGTCCCAATG
CTGTCGCGCGTGGTCTCGCCAGCAAAAAGACAACAACCGTTGGCGTTGTGATTCCAAATATTGCAAATAGTTATTTTTCT
ATCTTAGCTAAGGGTATTGACGATATCGCCGCTATGTATAAATATAATATTGTGCTTGCCTCCAGTGATGAAGATGATGA
CAAGGAGGTTAATGTTGTCAATACCCTTTTTGCCAAGCAAGTGGATGGTATTATTTTTATGGGGCATCACTTGACAGAAA
AAATCCGGGCCGAATTTTCACGCTCTCGTACTCCAGTTGTTTTGGCAGGAACTGTAGATCTTGATCATCAATTACCAAGC
GTCAACATTGACTATAGAGCTGCGGTGTCAAACGTTGTTGATATTTTAGCTGAAAATCATAAGTGTATCGCTTTTGTGTC
AGGACCACTCATTGATGATATCAATGGTAAAGTGCGCTTAGCAGGGTACAAAGAAGGGTTGAAGCACAATAAGCTTGACT
TCAAAGAAGGTCTTGTTTTTGAAGCGAACTATTCTTATAAAGAAGGATTTGAATTGGCGCAGCGCGTCATTAACTCAGGA
GCAACAGCGGCTTATGTGGCTGAAGATGAATTGGCAGCAGGCCTTTTAAACGGCTTGTTTGAAGCAGGTAAACGCGTACC
AGAGGACTTTGAAATCATCACCAGCAACGATTCACCAGTGGTTCAATACACTCGTCCCAATTTGAGTTCTATCAGTCAAC
CTGTTTATGACTTAGGTGCTGTTAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGTGGGACAACTAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7H1B9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

75.375

100

0.754
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.193

99.399

0.559