Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   VQ623_RS04690 Genome accession   NZ_CP142094
Coordinates   941648..942694 (+) Length   348 a.a.
NCBI ID   WP_037537960.1    Uniprot ID   A0AB38PEC5
Organism   Staphylococcus haemolyticus strain MLK17     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 936648..947694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VQ623_RS04665 (VQ623_04665) map 937532..938284 (+) 753 WP_011275369.1 type I methionyl aminopeptidase -
  VQ623_RS04670 (VQ623_04670) - 938394..939251 (-) 858 Protein_914 SDR family oxidoreductase -
  VQ623_RS04675 (VQ623_04675) - 939320..940327 (-) 1008 WP_053019077.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  VQ623_RS04680 (VQ623_04680) - 940539..940925 (+) 387 WP_037537962.1 hypothetical protein -
  VQ623_RS04685 (VQ623_04685) liaF 940950..941651 (+) 702 WP_011275374.1 cell wall-active antibiotics response protein LiaF -
  VQ623_RS04690 (VQ623_04690) vraS 941648..942694 (+) 1047 WP_037537960.1 sensor histidine kinase Regulator
  VQ623_RS04695 (VQ623_04695) vraR 942684..943313 (+) 630 WP_037551137.1 two-component system response regulator VraR Regulator
  VQ623_RS04700 (VQ623_04700) - 943376..944587 (-) 1212 WP_107612160.1 YihY/virulence factor BrkB family protein -
  VQ623_RS04705 (VQ623_04705) - 944788..945072 (-) 285 WP_011275378.1 YtxH domain-containing protein -
  VQ623_RS04710 (VQ623_04710) - 945078..945542 (-) 465 WP_037537954.1 low molecular weight protein-tyrosine-phosphatase -
  VQ623_RS04715 (VQ623_04715) - 945684..945893 (+) 210 WP_080290985.1 DUF1128 domain-containing protein -
  VQ623_RS04720 (VQ623_04720) - 945907..947154 (+) 1248 WP_107612159.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40138.53 Da        Isoelectric Point: 5.8508

>NTDB_id=921458 VQ623_RS04690 WP_037537960.1 941648..942694(+) (vraS) [Staphylococcus haemolyticus strain MLK17]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDIYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGSKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=921458 VQ623_RS04690 WP_037537960.1 941648..942694(+) (vraS) [Staphylococcus haemolyticus strain MLK17]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTATTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATAGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCG
CAAATCGAGCATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAACATTGAGCTCTATAACGAAACCATAGATAT
TTATCAAACATTAGTTCCGTTGAATCAAGAGTTACACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAGAATTATA
ATATGAATGATGTTAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTTAGT
CAACAACTTTTTGCAGCAAGCATGATGTTATCTGCAATAAAAGAAACAAAATTAGAGGCACCGCTTGATCAACAAATACC
AGTATTAGAGAAAATGGTACAGGAATCTCAACTTGAAATGCGCGCATTGTTACTTCATTTAAGACCTTTAGGACTGAAAG
ATAAATCTCTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTTAAGGTGCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCTAATGGATCTAAAGTTACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGATAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAACAAAGTTATGGATTAAAAAATATGAGGGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTTTCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAAGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.643

99.713

0.914