Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VOI49_RS03130 Genome accession   NZ_CP142018
Coordinates   576982..577791 (+) Length   269 a.a.
NCBI ID   WP_115252716.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain lu24     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 571982..582791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VOI49_RS03105 - 572356..573057 (-) 702 WP_003049949.1 amino acid ABC transporter permease -
  VOI49_RS03110 - 573071..573871 (-) 801 WP_003049950.1 transporter substrate-binding domain-containing protein -
  VOI49_RS03115 - 573871..574665 (-) 795 WP_003049951.1 amino acid ABC transporter ATP-binding protein -
  VOI49_RS03120 vicR 574923..575633 (+) 711 WP_003049952.1 response regulator YycF Regulator
  VOI49_RS03125 vicK 575626..576978 (+) 1353 WP_003049953.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VOI49_RS03130 vicX 576982..577791 (+) 810 WP_115252716.1 MBL fold metallo-hydrolase Regulator
  VOI49_RS03135 rnc 577890..578582 (+) 693 WP_003049954.1 ribonuclease III -
  VOI49_RS03140 smc 578583..582128 (+) 3546 WP_226314135.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30143.42 Da        Isoelectric Point: 6.0739

>NTDB_id=921014 VOI49_RS03130 WP_115252716.1 576982..577791(+) (vicX) [Streptococcus dysgalactiae strain lu24]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKIASLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHVFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDMACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=921014 VOI49_RS03130 WP_115252716.1 576982..577791(+) (vicX) [Streptococcus dysgalactiae strain lu24]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCGCCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTATCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATGT
TTTCCAAAGAGATAAAATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGTCATGACGCGGTTGATCCTC
AGTTTTACCGCATCATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGCTATGTTAGTGACCGAATGACAGGT
ATTATTGAAAATGCGGATGGCTACCTGATTGAATCCAATCATGACATTGAAATTTTACGCTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTATCTGACATGGGACATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGTCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCAGTAGGTACAGACTTTACTGTTCATGATACTTCCCCGGATATGGCCTGCCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758