Detailed information NTG0921004

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: VOI49_RS01940
• Genome accession: NZ_CP142018
• Coordinates: 359867..360793 (+)
• Length: 308 a.a.
• NCBI ID: WP_003049687.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain lu24
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 354867..365793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VOI49_RS01930	amiA	356329..358299 (+)	1971	WP_115246683.1	peptide ABC transporter substrate-binding protein	Regulator
VOI49_RS01935	amiC	358365..359867 (+)	1503	WP_003049686.1	ABC transporter permease	Regulator
VOI49_RS01940	amiD	359867..360793 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
VOI49_RS01945	amiE	360802..361872 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
VOI49_RS01950	amiF	361865..362788 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=921004 VOI49_RS01940 WP_003049687.1 359867..360793(+) (amiD) [Streptococcus dysgalactiae strain lu24]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=921004 VOI49_RS01940 WP_003049687.1 359867..360793(+) (amiD) [Streptococcus dysgalactiae strain lu24]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTAACAATCT
TATTGATGAGTTTCATTTACCCAATGTTTGCGAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTCTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTACAATGTCATCTCAAACATTCCTTCAATGTTAATCATCATTGTT
TTGACCTATTCATTAGGGGCTGGTTTTTGGAATTTAATTTTAGCTTTCTGTATTACTGGATGGATCGGTGTAGCTTATTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAAAACCTCTTACCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
AAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTCACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCTAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731