Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VDS57_RS16230 Genome accession   NZ_CP141839
Coordinates   3058523..3058714 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain PN1236     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3053523..3063714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS57_RS16205 (VDS57_16205) yjzC 3055431..3055610 (+) 180 WP_003245356.1 YjzC family protein -
  VDS57_RS16210 (VDS57_16210) yjzD 3055657..3055842 (-) 186 WP_003245236.1 YjzD family protein -
  VDS57_RS16215 (VDS57_16215) - 3056091..3056825 (+) 735 WP_014479433.1 hypothetical protein -
  VDS57_RS16220 (VDS57_16220) - 3056907..3057464 (+) 558 WP_014479435.1 hypothetical protein -
  VDS57_RS16225 (VDS57_16225) med 3057555..3058508 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  VDS57_RS16230 (VDS57_16230) comZ 3058523..3058714 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  VDS57_RS16235 (VDS57_16235) yjzB 3058744..3058983 (-) 240 WP_003232972.1 spore coat protein YjzB -
  VDS57_RS16240 (VDS57_16240) fabH 3059148..3060086 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  VDS57_RS16245 (VDS57_16245) fabF 3060109..3061350 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  VDS57_RS16250 (VDS57_16250) yjaZ 3061426..3062211 (+) 786 WP_324271334.1 DUF2268 domain-containing protein -
  VDS57_RS16255 (VDS57_16255) appD 3062402..3063388 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=920169 VDS57_RS16230 WP_046380930.1 3058523..3058714(+) (comZ) [Bacillus subtilis strain PN1236]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=920169 VDS57_RS16230 WP_046380930.1 3058523..3058714(+) (comZ) [Bacillus subtilis strain PN1236]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968