Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   VO180_RS17725 Genome accession   NZ_CP141826
Coordinates   3613780..3614733 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain XHA16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3608780..3619733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO180_RS17705 (VO180_17705) - 3609659..3611083 (+) 1425 WP_039252789.1 MDR family MFS transporter -
  VO180_RS17710 (VO180_17710) - 3611125..3612069 (-) 945 WP_324636131.1 siderophore ABC transporter substrate-binding protein -
  VO180_RS17715 (VO180_17715) - 3612091..3612849 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  VO180_RS17720 (VO180_17720) - 3612843..3613790 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  VO180_RS17725 (VO180_17725) ceuB 3613780..3614733 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  VO180_RS17730 (VO180_17730) - 3615147..3616511 (+) 1365 WP_199022338.1 aspartate kinase -
  VO180_RS17735 (VO180_17735) - 3616591..3616701 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  VO180_RS17740 (VO180_17740) phrC 3616850..3616969 (-) 120 WP_031378677.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  VO180_RS17745 (VO180_17745) rapC 3616953..3618101 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  VO180_RS17750 (VO180_17750) - 3618254..3619687 (-) 1434 WP_324636132.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=919847 VO180_RS17725 WP_015239156.1 3613780..3614733(-) (ceuB) [Bacillus velezensis strain XHA16]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=919847 VO180_RS17725 WP_015239156.1 3613780..3614733(-) (ceuB) [Bacillus velezensis strain XHA16]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536