Detailed information NTG0919387

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VA210_RS04165
• Genome accession: NZ_CP141773
• Coordinates: 863312..864112 (-)
• Length: 266 a.a.
• NCBI ID: WP_324713302.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P08205
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 858312..869112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA210_RS04115	-	859117..859902 (-)	786	WP_324713292.1	hypothetical protein	-
VA210_RS04120	-	859902..860283 (-)	382	Protein_806	DUF1294 domain-containing protein	-
VA210_RS04125	-	860622..860783 (-)	162	WP_014536434.1	lysozyme	-
VA210_RS04130	-	860803..861048 (-)	246	WP_121025308.1	lysozyme	-
VA210_RS04135	-	861098..861241 (-)	144	WP_324713296.1	glycoside hydrolase family protein	-
VA210_RS04140	-	861291..861851 (-)	561	WP_324713297.1	hypothetical protein	-
VA210_RS04145	-	861835..862173 (-)	339	WP_000699916.1	hypothetical protein	-
VA210_RS04150	-	862300..862620 (-)	321	WP_324713298.1	hypothetical protein	-
VA210_RS04155	-	862634..862780 (-)	147	WP_245015044.1	tetratricopeptide repeat protein	-
VA210_RS04160	dprB	862911..863315 (-)	405	WP_324713301.1	Holliday junction resolvase RuvX	Machinery gene
VA210_RS04165	dprA	863312..864112 (-)	801	WP_324713302.1	DNA-processing protein DprA	Machinery gene
VA210_RS04170	minE	864119..864352 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
VA210_RS04175	minD	864349..865155 (-)	807	WP_001019097.1	septum site-determining protein MinD	-
VA210_RS04180	ilvC	865180..866172 (-)	993	WP_324713309.1	ketol-acid reductoisomerase	-
VA210_RS04190	-	866421..867203 (+)	783	WP_324713310.1	NAD+ synthase	-
VA210_RS04195	-	867200..868138 (+)	939	WP_324713312.1	tetraacyldisaccharide 4'-kinase	-
VA210_RS04200	pseH	868071..868613 (-)	543	WP_324713313.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29833.76 Da
• Isoelectric Point: 9.1603

>NTDB_id=919387 VA210_RS04165 WP_324713302.1 863312..864112(-) (dprA) [Helicobacter pylori strain P08205]
MKSHFQYSALENIPKAFDILKNPPKQLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=919387 VA210_RS04165 WP_324713302.1 863312..864112(-) (dprA) [Helicobacter pylori strain P08205]
ATGAAAAGCCATTTCCAATACAGCGCACTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAAACCCCCCTAAACAGCT
CTATTGTGTGGGCGATACCAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAATGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGTGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414