Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   VNN37_RS04700 Genome accession   NZ_CP141707
Coordinates   921165..922412 (+) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain M21102102     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 916165..927412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VNN37_RS04670 (VNN37_04670) htrA 916206..917423 (-) 1218 WP_003133516.1 trypsin-like peptidase domain-containing protein Regulator
  VNN37_RS04675 (VNN37_04675) rlmH 917727..918206 (+) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VNN37_RS04680 (VNN37_04680) - 918203..918850 (+) 648 WP_042219626.1 DNA alkylation repair protein -
  VNN37_RS04685 (VNN37_04685) yajC 918925..919260 (+) 336 WP_014025468.1 preprotein translocase subunit YajC -
  VNN37_RS04690 (VNN37_04690) - 919461..920198 (+) 738 WP_003133511.1 isoprenyl transferase -
  VNN37_RS04695 (VNN37_04695) - 920195..920989 (+) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  VNN37_RS04700 (VNN37_04700) eeP 921165..922412 (+) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  VNN37_RS04705 (VNN37_04705) - 922439..924289 (+) 1851 WP_264308064.1 proline--tRNA ligase -
  VNN37_RS04710 (VNN37_04710) - 925137..925745 (+) 609 Protein_902 PolC-type DNA polymerase III N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=918635 VNN37_RS04700 WP_014025467.1 921165..922412(+) (eeP) [Lactococcus garvieae strain M21102102]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=918635 VNN37_RS04700 WP_014025467.1 921165..922412(+) (eeP) [Lactococcus garvieae strain M21102102]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGGCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGGGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAAATTTTAACAAATTTTGCCGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTTCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATAAAGCTGGATATTGAACGGGATGGCGCGTCGAAGACACTAGAGCTCAAACC
GGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGTCCTGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGTCTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGAAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAGGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566