Detailed information NTG0918133

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: AB1F75_RS07125
• Genome accession: NZ_CP160396
• Coordinates: 1390210..1390815 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1385210..1395815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS07085 (AB1F75_07085)	-	1385374..1385514 (-)	141	WP_004398683.1	hypothetical protein	-
AB1F75_RS07090 (AB1F75_07090)	-	1385521..1385889 (-)	369	WP_257724450.1	DUF5412 domain-containing protein	-
AB1F75_RS07095 (AB1F75_07095)	-	1385893..1385967 (-)	75	Protein_1386	hypothetical protein	-
AB1F75_RS07100 (AB1F75_07100)	-	1386052..1386174 (+)	123	WP_003229707.1	hypothetical protein	-
AB1F75_RS07105 (AB1F75_07105)	yrzF	1386220..1386867 (-)	648	WP_015251558.1	phosphotransferase	-
AB1F75_RS07110 (AB1F75_07110)	iolG	1387105..1388133 (+)	1029	WP_015251559.1	inositol 2-dehydrogenase	-
AB1F75_RS07115 (AB1F75_07115)	csbX	1388204..1389511 (+)	1308	WP_003246197.1	MFS transporter	-
AB1F75_RS07120 (AB1F75_07120)	bofC	1389559..1390071 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
AB1F75_RS07125 (AB1F75_07125)	ruvA	1390210..1390815 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
AB1F75_RS07130 (AB1F75_07130)	ruvB	1390826..1391830 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AB1F75_RS07135 (AB1F75_07135)	yrzS	1391823..1392023 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
AB1F75_RS07140 (AB1F75_07140)	queA	1392053..1393081 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
AB1F75_RS07145 (AB1F75_07145)	tgt	1393108..1394253 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
AB1F75_RS07150 (AB1F75_07150)	yajC	1394290..1394556 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
AB1F75_RS07155 (AB1F75_07155)	-	1394613..1395002 (-)	390	WP_004398667.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=918133 AB1F75_RS07125 WP_003229717.1 1390210..1390815(+) (ruvA) [Bacillus subtilis subsp. subtilis strain BSP1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=918133 AB1F75_RS07125 WP_003229717.1 1390210..1390815(+) (ruvA) [Bacillus subtilis subsp. subtilis strain BSP1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408