Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U4959_RS03285 Genome accession   NZ_CP141284
Coordinates   696525..696908 (+) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter junii strain H1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 691525..701908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U4959_RS03255 (U4959_03255) - 692028..692363 (+) 336 WP_004908755.1 DUF2004 domain-containing protein -
  U4959_RS03260 (U4959_03260) - 692388..692738 (+) 351 WP_004908749.1 DUF488 domain-containing protein -
  U4959_RS03265 (U4959_03265) - 692821..693165 (+) 345 WP_004908748.1 zinc ribbon domain-containing protein YjdM -
  U4959_RS03270 (U4959_03270) - 693307..693642 (+) 336 WP_004908746.1 YegP family protein -
  U4959_RS03275 (U4959_03275) - 693701..695416 (-) 1716 WP_004908743.1 proline--tRNA ligase -
  U4959_RS03280 (U4959_03280) - 695576..696244 (-) 669 WP_004908741.1 hypothetical protein -
  U4959_RS03285 (U4959_03285) pilG 696525..696908 (+) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  U4959_RS03290 (U4959_03290) - 696929..697291 (+) 363 WP_004664659.1 PleD family two-component system response regulator -
  U4959_RS03295 (U4959_03295) - 697330..697866 (+) 537 WP_004908738.1 chemotaxis protein CheW -
  U4959_RS03300 (U4959_03300) - 697913..700000 (+) 2088 WP_126131741.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=916881 U4959_RS03285 WP_004640629.1 696525..696908(+) (pilG) [Acinetobacter junii strain H1]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=916881 U4959_RS03285 WP_004640629.1 696525..696908(+) (pilG) [Acinetobacter junii strain H1]
ATGGAAGATAAATTTCAAAATTTAAAAGTAATGGTGATTGACGATTCTAAAACGATTCGACGTACAGCTGAGACACTGTT
ACAACGCGAAGGTTGTGAGGTGATTACAGCTGTCGATGGTTTTGAAGCATTATCGAAAATTGCGGAAGCAAATCCTGATA
TCGTATTTGTCGATATTATGATGCCTCGTCTAGATGGTTACCAAACCTGTGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATCATGTTATCAAGCAAAGATGGTTTGTTTGATCAAGCCAAAGGGCGTGTTGTGGGGTCAGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37